RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 LINC00315P59091 139 aa12.33□□□□□ -0.44
VAT1-208ENST00000590924 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
VAT1-208ENST00000590924 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
VAT1-208ENST00000590924 RIGQ13278 110 aa12.32□□□□□ -0.44
VAT1-208ENST00000590924 Q6ZSN1 163 aa12.32□□□□□ -0.44
VAT1-208ENST00000590924 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
VAT1-208ENST00000590924 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 A0A1B0GW15 77 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 K7EQD1 137 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 GYPEP15421 78 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 EVI2AP22794 236 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 IMMP2LQ96T52 175 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
VAT1-208ENST00000590924 ABCA13Q86UQ4 5058 aa12.3□□□□□ -0.44
VAT1-208ENST00000590924 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
VAT1-208ENST00000590924 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
VAT1-208ENST00000590924 FRZBQ92765 325 aa12.3□□□□□ -0.44
VAT1-208ENST00000590924 A0A087WWC5 75 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 F5H697 171 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 SRIP30626 198 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 ZNF56Q15929 161 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
VAT1-208ENST00000590924 H7C1H1 209 aa12.28□□□□□ -0.44
VAT1-208ENST00000590924 RHEBQ15382 184 aa12.28□□□□□ -0.44
VAT1-208ENST00000590924 APOBP04114 4563 aaKnown RBP12.27□□□□□ -0.45
VAT1-208ENST00000590924 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
VAT1-208ENST00000590924 S100A8P05109 93 aa12.27□□□□□ -0.45
VAT1-208ENST00000590924 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.45
VAT1-208ENST00000590924 SLC7A5P1Q8MH63 180 aa12.27□□□□□ -0.45
VAT1-208ENST00000590924 SVBPQ8N300 66 aa12.27□□□□□ -0.45
VAT1-208ENST00000590924 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
VAT1-208ENST00000590924 SNAPINO95295 136 aa12.26□□□□□ -0.45
VAT1-208ENST00000590924 APOC3P02656 99 aa12.26□□□□□ -0.45
VAT1-208ENST00000590924 TIRAPP58753 221 aa12.26□□□□□ -0.45
VAT1-208ENST00000590924 MAPKAPK5-AS1Q8N8E1 139 aa12.26□□□□□ -0.45
VAT1-208ENST00000590924 M0QY20 66 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 SIVA1O15304 175 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 MGPP08493 103 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 LINC00694P0DN24 101 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
VAT1-208ENST00000590924 LYPD5Q6UWN5 251 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
VAT1-208ENST00000590924 DNAJC30Q96LL9 226 aa12.25□□□□□ -0.45
VAT1-208ENST00000590924 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 TRAV9-1A0A075B6T8 112 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 A0A1B0GXF2 115 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 KRTAP10-2P60368 255 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 HBBP68871 147 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 KCNIP4Q6PIL6 250 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 BTF3L4Q96K17 158 aa12.24□□□□□ -0.45
VAT1-208ENST00000590924 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 GAGE1Q13065 139 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 GAGE4Q13068 117 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 GAGE5Q13069 117 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 Q6ZRN7 208 aaPredicted RBP12.23□□□□□ -0.45
VAT1-208ENST00000590924 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 RPS10P5Q9NQ39 176 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 Q9UF83 564 aa12.23□□□□□ -0.45
VAT1-208ENST00000590924 DNAH5Q8TE73 4624 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 RAB4AP20338 218 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 Q8N1X5 172 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
VAT1-208ENST00000590924 S100PP25815 95 aa12.21□□□□□ -0.45
VAT1-208ENST00000590924 CAMPP49913 170 aa12.21□□□□□ -0.45
VAT1-208ENST00000590924 UBE2D3P61077 147 aa12.21□□□□□ -0.45
VAT1-208ENST00000590924 UBE2D2P62837 147 aa12.21□□□□□ -0.45
VAT1-208ENST00000590924 MRPL54Q6P161 138 aaKnown RBP12.21□□□□□ -0.45
VAT1-208ENST00000590924 MRAP2Q96G30 205 aa12.21□□□□□ -0.45
VAT1-208ENST00000590924 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
VAT1-208ENST00000590924 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.2□□□□□ -0.46
VAT1-208ENST00000590924 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
VAT1-208ENST00000590924 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
VAT1-208ENST00000590924 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
VAT1-208ENST00000590924 AMN1Q8IY45 258 aa12.19□□□□□ -0.46
VAT1-208ENST00000590924 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
VAT1-208ENST00000590924 PPP1R17O96001 155 aa12.18□□□□□ -0.46
VAT1-208ENST00000590924 TMEM97Q5BJF2 176 aa12.17□□□□□ -0.46
VAT1-208ENST00000590924 LELP1Q5T871 98 aa12.17□□□□□ -0.46
VAT1-208ENST00000590924 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
VAT1-208ENST00000590924 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
VAT1-208ENST00000590924 PPBPP02775 128 aa12.15□□□□□ -0.46
VAT1-208ENST00000590924 COX19Q49B96 90 aa12.15□□□□□ -0.46
VAT1-208ENST00000590924 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.46
VAT1-208ENST00000590924 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
VAT1-208ENST00000590924 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 K7EP13 123 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 EREGO14944 169 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 CDPF1Q6NVV7 123 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
VAT1-208ENST00000590924 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
VAT1-208ENST00000590924 CKS2P33552 79 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms