RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 GOLT1AQ6ZVE7 132 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 NUP35Q8NFH5 326 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 OR10D4PQ8NGN7 298 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 LINC00467Q9BRT7 94 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 TRGV2A0A075B6R0 118 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 HIGD1CA8MV81 97 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 PAX4O43316 350 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-209ENST00000590588 FABP4P15090 132 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-209ENST00000590588 DAZ2Q13117 558 aaKnown RBP7.36□□□□□ -1.23
ZNF540-209ENST00000590588 IQCJQ1A5X6 159 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 OR8A1Q8NGG7 326 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
ZNF540-209ENST00000590588 TRAV34A0A0B4J273 112 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 APCSP02743 223 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 LCE2AQ5TA79 106 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-209ENST00000590588 Q6ZTI0 123 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 C10orf126Q8N4M7 172 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 NHLRC2Q8NBF2 726 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 LINC00479Q96M42 142 aa7.35□□□□□ -1.23
ZNF540-209ENST00000590588 CRYGDP07320 174 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 PMCHP20382 165 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 RIGQ13278 110 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
ZNF540-209ENST00000590588 NEGR1Q7Z3B1 354 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 EXOC3-AS1Q8N2X6 119 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 KCNS1Q96KK3 526 aa7.34□□□□□ -1.23
ZNF540-209ENST00000590588 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 RS1O15537 224 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 SLAQ13239 276 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 PRR27Q6MZM9 219 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 PRNTQ86SH4 94 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 BAGE3Q86Y29 109 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 OR2D3Q8NGH3 330 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
ZNF540-209ENST00000590588 TSTD3H0UI37 97 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 CTRLP40313 264 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 PKIAP61925 76 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 KIR3DS1Q14943 382 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 GFI1BQ5VTD9 330 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
ZNF540-209ENST00000590588 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 SCXQ7RTU7 201 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
ZNF540-209ENST00000590588 ZC2HC1AQ96GY0 325 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
ZNF540-209ENST00000590588 F2Z2F3 143 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 GZMBP10144 247 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 TCL1AP56279 114 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 RAB4BP61018 213 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 MRPL52Q86TS9 123 aaKnown RBP7.31□□□□□ -1.24
ZNF540-209ENST00000590588 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-209ENST00000590588 HHLA3Q9XRX5 114 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 LAMTOR2Q9Y2Q5 125 aa7.31□□□□□ -1.24
ZNF540-209ENST00000590588 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 FABP5P3A8MUU1 101 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 M0R3E3 92 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 SERF1AO75920 110 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 OR5AL1P0C617 328 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 SRIP30626 198 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 ASIPP42127 132 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 CRYBA4P53673 196 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 C18orf32Q8TCD1 76 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 TP53TG3Q9ULZ0 132 aa7.3□□□□□ -1.24
ZNF540-209ENST00000590588 TRAV8-1A0A0A6YYK1 113 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 PPBPP02775 128 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 GPX1P07203 203 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 ZNF138P52744 262 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 LINC00310P59036 64 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 CTAG1AP78358 180 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 LBHQ53QV2 105 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-209ENST00000590588 PDZD11Q5EBL8 140 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 LINC00477Q96M19 166 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 ODF3Q96PU9 254 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 CHAC1Q9BUX1 264 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 SAMD10Q9BYL1 202 aa7.29□□□□□ -1.24
ZNF540-209ENST00000590588 TRAV12-3A0A0B4J271 114 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 IBA57-AS1B1ANH7 110 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 H3BTX0 84 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 SH2D1AO60880 128 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 TDRG1Q3Y452 100 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 TNXBP22105 4242 aa7.28□□□□□ -1.24
ZNF540-209ENST00000590588 C20orf202A1L168 122 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 GRIFINA4D1Z8 144 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 K7EQD1 137 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms