RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 A0A087WWC5 75 aa12.18□□□□□ -0.46
DDX39A-212ENST00000590260 F2Z2F3 143 aa12.18□□□□□ -0.46
DDX39A-212ENST00000590260 M0QY20 66 aa12.18□□□□□ -0.46
DDX39A-212ENST00000590260 NIT1Q86X76 327 aa12.18□□□□□ -0.46
DDX39A-212ENST00000590260 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
DDX39A-212ENST00000590260 XKRY2A2RUG3 117 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 F5H697 171 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 NTM-AS1Q6ZSK4 140 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 Q9HAA7 133 aa12.17□□□□□ -0.46
DDX39A-212ENST00000590260 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
DDX39A-212ENST00000590260 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
DDX39A-212ENST00000590260 MGPP08493 103 aa12.15□□□□□ -0.46
DDX39A-212ENST00000590260 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
DDX39A-212ENST00000590260 LAGE3Q14657 143 aa12.15□□□□□ -0.46
DDX39A-212ENST00000590260 TRBV6-8A0A0A6YYG3 113 aa12.14□□□□□ -0.47
DDX39A-212ENST00000590260 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
DDX39A-212ENST00000590260 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-212ENST00000590260 ZNF727A8MUV8 499 aa12.13□□□□□ -0.47
DDX39A-212ENST00000590260 WFDC2Q14508 124 aa12.13□□□□□ -0.47
DDX39A-212ENST00000590260 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
DDX39A-212ENST00000590260 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
DDX39A-212ENST00000590260 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
DDX39A-212ENST00000590260 CT83Q5H943 113 aa12.12□□□□□ -0.47
DDX39A-212ENST00000590260 TWIST1Q15672 202 aa12.11□□□□□ -0.47
DDX39A-212ENST00000590260 RPL23P62829 140 aaKnown RBP12.1□□□□□ -0.47
DDX39A-212ENST00000590260 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 PGLYRP4Q96LB8 373 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 OSTCQ9NRP0 149 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 V9GYV3 84 aa12.1□□□□□ -0.47
DDX39A-212ENST00000590260 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
DDX39A-212ENST00000590260 A8MWL6 223 aa12.09□□□□□ -0.47
DDX39A-212ENST00000590260 CDK2AP2O75956 126 aa12.09□□□□□ -0.47
DDX39A-212ENST00000590260 RASL11AQ6T310 242 aa12.09□□□□□ -0.47
DDX39A-212ENST00000590260 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
DDX39A-212ENST00000590260 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
DDX39A-212ENST00000590260 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
DDX39A-212ENST00000590260 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
DDX39A-212ENST00000590260 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
DDX39A-212ENST00000590260 DNAH8Q96JB1 4490 aa12.07□□□□□ -0.48
DDX39A-212ENST00000590260 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
DDX39A-212ENST00000590260 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
DDX39A-212ENST00000590260 TSKUQ8WUA8 353 aa12.07□□□□□ -0.48
DDX39A-212ENST00000590260 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
DDX39A-212ENST00000590260 TRAV8-3A0A0A6YYJ7 113 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 HIGD1CA8MV81 97 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 H7C1H1 209 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 PSCAO43653 123 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 FAM74A3Q4VXF1 159 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 ATRAIDQ6UW56 229 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 Q8N976 141 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
DDX39A-212ENST00000590260 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
DDX39A-212ENST00000590260 A0A087WX48 190 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 EREGO14944 169 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 Q8N814 137 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 UBE2WQ96B02 151 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
DDX39A-212ENST00000590260 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
DDX39A-212ENST00000590260 GAGE6Q13070 117 aa12.04□□□□□ -0.48
DDX39A-212ENST00000590260 PEA15Q15121 130 aa12.04□□□□□ -0.48
DDX39A-212ENST00000590260 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
DDX39A-212ENST00000590260 FAM231BA6NCW3 169 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 LECT2O14960 151 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 TMEM97Q5BJF2 176 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 C15orf54Q8N8G6 183 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 TM2D2Q9BX73 214 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
DDX39A-212ENST00000590260 RBX1P62877 108 aa12.02□□□□□ -0.49
DDX39A-212ENST00000590260 ADIRFQ15847 76 aa12.02□□□□□ -0.49
DDX39A-212ENST00000590260 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
DDX39A-212ENST00000590260 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 XGP55808 180 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 FRZBQ92765 325 aa12.01□□□□□ -0.49
DDX39A-212ENST00000590260 IFITM2Q01629 132 aa12□□□□□ -0.49
DDX39A-212ENST00000590260 ELOBQ15370 118 aa12□□□□□ -0.49
DDX39A-212ENST00000590260 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
DDX39A-212ENST00000590260 TMEM191AQ9H0A3 160 aa12□□□□□ -0.49
DDX39A-212ENST00000590260 PRR34Q9NV39 138 aa12□□□□□ -0.49
DDX39A-212ENST00000590260 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
DDX39A-212ENST00000590260 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
DDX39A-212ENST00000590260 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms