RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
RFX1-207ENST00000589937 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 F5H697 171 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 C1QBP02746 253 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 MGPP08493 103 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 ATRAIDQ6UW56 229 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
RFX1-207ENST00000589937 IGLC6P0CF74 106 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 RMI2Q96E14 147 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 AP1S3Q96PC3 154 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 CHCHD5Q9BSY4 110 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
RFX1-207ENST00000589937 TRAV1-1A0A0B4J248 108 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 C19orf71A6NCJ1 209 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 HLA-DQA1P01909 254 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
RFX1-207ENST00000589937 GAGE6Q13070 117 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 OR2D3Q8NGH3 330 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 CHCHD7Q9BUK0 85 aa8.26□□□□□ -1.09
RFX1-207ENST00000589937 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
RFX1-207ENST00000589937 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
RFX1-207ENST00000589937 KCNIP4Q6PIL6 250 aa8.25□□□□□ -1.09
RFX1-207ENST00000589937 FER1L6-AS1Q8NA97 138 aa8.25□□□□□ -1.09
RFX1-207ENST00000589937 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
RFX1-207ENST00000589937 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
RFX1-207ENST00000589937 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 CRPP02741 224 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 GNG4P50150 75 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 SULT1A2P50226 295 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 RBX1P62877 108 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 MEF2BQ02080 365 aaPredicted RBP8.24□□□□□ -1.09
RFX1-207ENST00000589937 VAX2Q9UIW0 290 aa8.24□□□□□ -1.09
RFX1-207ENST00000589937 M0QY20 66 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 BCL2P10415 239 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
RFX1-207ENST00000589937 ELOBQ15370 118 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 GFRA4Q9GZZ7 299 aa8.23□□□□□ -1.09
RFX1-207ENST00000589937 NKX2-5P52952 324 aaPredicted RBP8.22□□□□□ -1.09
RFX1-207ENST00000589937 Q0VG73 95 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 LYZL1Q6UWQ5 148 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 LINC00269Q8N2A0 174 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 CIRBP-AS1Q8TBR5 109 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
RFX1-207ENST00000589937 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
RFX1-207ENST00000589937 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 K7EN84 100 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 P01737 135 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 PRSS1P07477 247 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 RAB5CP51148 216 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 DAZAP1Q96EP5 407 aaKnown RBP8.21□□□□□ -1.1
RFX1-207ENST00000589937 MED9Q9NWA0 146 aa8.21□□□□□ -1.1
RFX1-207ENST00000589937 IGLV4-60A0A075B6I1 120 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 PDE6DO43924 150 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
RFX1-207ENST00000589937 CTRLP40313 264 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 IQCJQ1A5X6 159 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
RFX1-207ENST00000589937 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
RFX1-207ENST00000589937 hCG_2014768A0A024R1R8 64 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 PANO1I0J062 215 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 IFNA1P01562 189 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
RFX1-207ENST00000589937 CACNG7P62955 275 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 MIAQ16674 131 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 C20orf203Q8NBC4 194 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
RFX1-207ENST00000589937 NTF3P20783 257 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
RFX1-207ENST00000589937 RASL11AQ6T310 242 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 SLC51BQ86UW2 128 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 C9orf62Q8N4C0 152 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
RFX1-207ENST00000589937 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
RFX1-207ENST00000589937 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
RFX1-207ENST00000589937 TEX46H3BTG2 121 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 J3QL48 77 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 FOXA3P55318 350 aaPredicted RBP8.17□□□□□ -1.1
RFX1-207ENST00000589937 REG3AQ06141 175 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
RFX1-207ENST00000589937 RPP21Q9H633 154 aaKnown RBP8.17□□□□□ -1.1
RFX1-207ENST00000589937 H7C1H1 209 aa8.16□□□□□ -1.1
RFX1-207ENST00000589937 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
RFX1-207ENST00000589937 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
RFX1-207ENST00000589937 PKIAP61925 76 aa8.16□□□□□ -1.1
RFX1-207ENST00000589937 ALKAL2Q6UX46 152 aa8.16□□□□□ -1.1
RFX1-207ENST00000589937 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms