RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 A0A087WWC5 75 aa13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 HBBP68871 147 aa13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 RPL36AP83881 106 aaKnown RBP13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 ATP6V0E2Q8NHE4 81 aa13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 RPL36ALQ969Q0 106 aaKnown RBP13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
CLPTM1-209ENST00000588855 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 A0A1B0GW15 77 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 H7C1H1 209 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 ATP5L2Q7Z4Y8 100 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 GATD1Q8NB37 220 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
CLPTM1-209ENST00000588855 SNAPINO95295 136 aa13.05□□□□□ -0.32
CLPTM1-209ENST00000588855 UBE2D3P61077 147 aa13.05□□□□□ -0.32
CLPTM1-209ENST00000588855 UBE2D2P62837 147 aa13.05□□□□□ -0.32
CLPTM1-209ENST00000588855 RASL11AQ6T310 242 aa13.05□□□□□ -0.32
CLPTM1-209ENST00000588855 TMEM242Q9NWH2 141 aa13.05□□□□□ -0.32
CLPTM1-209ENST00000588855 RAB4AP20338 218 aa13.04□□□□□ -0.32
CLPTM1-209ENST00000588855 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
CLPTM1-209ENST00000588855 BTF3L4Q96K17 158 aa13.04□□□□□ -0.32
CLPTM1-209ENST00000588855 S100A8P05109 93 aa13.03□□□□□ -0.32
CLPTM1-209ENST00000588855 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
CLPTM1-209ENST00000588855 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
CLPTM1-209ENST00000588855 TIRAPP58753 221 aa13.03□□□□□ -0.32
CLPTM1-209ENST00000588855 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
CLPTM1-209ENST00000588855 GAS8-AS1O95177 125 aa13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 FAM104BQ5XKR9 115 aa13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 RPL39LQ96EH5 51 aaKnown RBP13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 TNFRSF18Q9Y5U5 241 aa13.02□□□□□ -0.33
CLPTM1-209ENST00000588855 IGHV3-38A0A0C4DH36 116 aa13.01□□□□□ -0.33
CLPTM1-209ENST00000588855 IGLV2-18A0A075B6J9 118 aa13□□□□□ -0.33
CLPTM1-209ENST00000588855 NCR2O95944 276 aa13□□□□□ -0.33
CLPTM1-209ENST00000588855 S100PP25815 95 aa13□□□□□ -0.33
CLPTM1-209ENST00000588855 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
CLPTM1-209ENST00000588855 ATRAIDQ6UW56 229 aa13□□□□□ -0.33
CLPTM1-209ENST00000588855 MRAP2Q96G30 205 aa13□□□□□ -0.33
CLPTM1-209ENST00000588855 TRAV9-1A0A075B6T8 112 aa12.99□□□□□ -0.33
CLPTM1-209ENST00000588855 SMKR1H3BMG3 65 aa12.99□□□□□ -0.33
CLPTM1-209ENST00000588855 WFDC10BQ8IUB3 73 aa12.99□□□□□ -0.33
CLPTM1-209ENST00000588855 FRZBQ92765 325 aa12.99□□□□□ -0.33
CLPTM1-209ENST00000588855 RPS10P46783 165 aaKnown RBP12.98□□□□□ -0.33
CLPTM1-209ENST00000588855 LELP1Q5T871 98 aa12.98□□□□□ -0.33
CLPTM1-209ENST00000588855 Q9H8V8 135 aa12.98□□□□□ -0.33
CLPTM1-209ENST00000588855 OR10J3Q5JRS4 329 aa12.98□□□□□ -0.33
CLPTM1-209ENST00000588855 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-209ENST00000588855 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-209ENST00000588855 DNAH2Q9P225 4427 aa12.97□□□□□ -0.33
CLPTM1-209ENST00000588855 SIVA1O15304 175 aa12.96□□□□□ -0.33
CLPTM1-209ENST00000588855 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
CLPTM1-209ENST00000588855 M0R2N4 97 aa12.95□□□□□ -0.34
CLPTM1-209ENST00000588855 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.95□□□□□ -0.34
CLPTM1-209ENST00000588855 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 CKS2P33552 79 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 TMEM136Q6ZRR5 245 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 NRACQ8N912 160 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
CLPTM1-209ENST00000588855 SDHAF1A6NFY7 115 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 D6R8Y8 96 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 NBDYA0A0U1RRE5 68 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 ELOBQ15370 118 aa12.93□□□□□ -0.34
CLPTM1-209ENST00000588855 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
CLPTM1-209ENST00000588855 TGIF2-C20orf24A0A0A6YYL0 155 aa12.92□□□□□ -0.34
CLPTM1-209ENST00000588855 TMEM70Q9BUB7 260 aa12.92□□□□□ -0.34
CLPTM1-209ENST00000588855 KRTAP1-5Q9BYS1 174 aa12.92□□□□□ -0.34
CLPTM1-209ENST00000588855 DNAH10OSP0CZ25 163 aa12.91□□□□□ -0.34
CLPTM1-209ENST00000588855 TMEM97Q5BJF2 176 aa12.91□□□□□ -0.34
CLPTM1-209ENST00000588855 Q6ZR54 194 aa12.91□□□□□ -0.34
CLPTM1-209ENST00000588855 PPP1R17O96001 155 aa12.9□□□□□ -0.34
CLPTM1-209ENST00000588855 NPYP01303 97 aa12.9□□□□□ -0.34
CLPTM1-209ENST00000588855 CBLN2Q8IUK8 224 aa12.9□□□□□ -0.34
CLPTM1-209ENST00000588855 ORMDL3Q8N138 153 aa12.9□□□□□ -0.34
CLPTM1-209ENST00000588855 Q8N3U1 123 aa12.9□□□□□ -0.34
CLPTM1-209ENST00000588855 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
CLPTM1-209ENST00000588855 PPBPP02775 128 aa12.89□□□□□ -0.35
CLPTM1-209ENST00000588855 POLR2KP53803 58 aaKnown RBP12.89□□□□□ -0.35
CLPTM1-209ENST00000588855 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
CLPTM1-209ENST00000588855 COTL1Q14019 142 aa12.89□□□□□ -0.35
CLPTM1-209ENST00000588855 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 LINC01556Q5JQF7 62 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 YPEL4Q96NS1 127 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 TRBV27A0A0K0K1C4 114 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 I3L3M4 83 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 IGHV3-30P01768 117 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 IGHV3-33P01772 117 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms