RNA–Protein interactions for RNA: ENST00000587877.1

LINC01478-201, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 1 (best) BASIC

Gene LINC01478, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-201ENST00000587877 ANKHD1Q8IWZ3 2542 aaKnown RBP4.3□□□□□ -1.72
LINC01478-201ENST00000587877 TRAV2A0A0B4J234 112 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 H3BT86 120 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 K7EQG2 157 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 TIMM17BO60830 172 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 MRPS36P82909 103 aaKnown RBP4.3□□□□□ -1.72
LINC01478-201ENST00000587877 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 PIMREGQ9BSJ6 248 aa4.3□□□□□ -1.72
LINC01478-201ENST00000587877 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 ZZEF1O43149 2961 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 IGKV3-7A0A075B6H7 116 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 H3BUX3 64 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 EIF4EBP3O60516 100 aaPredicted RBP4.29□□□□□ -1.72
LINC01478-201ENST00000587877 SNCGO76070 127 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 COX6CP09669 75 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 Q8N1Y9 231 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 EP300Q09472 2414 aaPredicted RBP4.29□□□□□ -1.72
LINC01478-201ENST00000587877 ARHGAP32A7KAX9 2087 aa4.29□□□□□ -1.72
LINC01478-201ENST00000587877 IGHV1-58A0A0C4DH39 117 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 A0A0J9YXV3 536 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 FAM240AA0A1B0GVK7 77 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 IGHV3-30-3P0DP02 117 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 IFITM1P13164 125 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 GAGE5Q13069 117 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 GAGE6Q13070 117 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 Q1RN00 199 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 CLUHP3Q96NS8 147 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 LITAFQ99732 161 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 POLEQ07864 2286 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 TRAV8-4A0A0B4J246 113 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 H3BMM0 161 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 CD28P10747 220 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 PSMB8P28062 276 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 LY6EQ16553 131 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 MIAQ16674 131 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 C10orf105Q8TEF2 133 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 NTN5Q8WTR8 489 aaPredicted RBP4.28□□□□□ -1.72
LINC01478-201ENST00000587877 UBE2WQ96B02 151 aa4.28□□□□□ -1.72
LINC01478-201ENST00000587877 CNOT1A5YKK6 2376 aaKnown RBP4.27□□□□□ -1.73
LINC01478-201ENST00000587877 IGHV3OR16-10A0A075B7F0 116 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 A8MTW9 85 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 TRIAP1O43715 76 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 TGFAP01135 160 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 IGHV4-38-2P0DP08 117 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 GATA3P23771 443 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 BLCAPP62952 87 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
LINC01478-201ENST00000587877 ICOSQ9Y6W8 199 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 CEP250Q9BV73 2442 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 PCNX1Q96RV3 2341 aa4.27□□□□□ -1.73
LINC01478-201ENST00000587877 MSMBP08118 114 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 DEFB121Q5J5C9 76 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 VSIG2Q96IQ7 327 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 DNAJC30Q96LL9 226 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 NDUFA12Q9UI09 145 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 MAP1BP46821 2468 aaKnown RBP4.26□□□□□ -1.73
LINC01478-201ENST00000587877 ACACAQ13085 2346 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 H7C2G1 150 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
LINC01478-201ENST00000587877 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 TMEM61Q8N0U2 210 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 COPS9Q8WXC6 57 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 PPDPFQ9H3Y8 114 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 ZFHX4Q86UP3 3567 aa4.26□□□□□ -1.73
LINC01478-201ENST00000587877 TPRP12270 2363 aaKnown RBP4.26□□□□□ -1.73
LINC01478-201ENST00000587877 MUC4Q99102 2169 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 ANKRD11Q6UB99 2663 aaPredicted RBP4.25□□□□□ -1.73
LINC01478-201ENST00000587877 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 LST1O00453 97 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 TIRAPP58753 221 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 FAM104AQ969W3 186 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 SPXQ9BT56 116 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 PRORYQ9H606 182 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 CFAP47Q6ZTR5 3102 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 WNK2Q9Y3S1 2297 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 GAGE12JA6NER3 117 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 NDUFA1O15239 70 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 GAGE7O76087 117 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 ACYP1P07311 99 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 PRSS2P07478 247 aa4.25□□□□□ -1.73
LINC01478-201ENST00000587877 ELANEP08246 267 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms