RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 SSBP4Q9BWG4 385 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-216ENST00000586813 MUC21A0A0G2JKD1 596 aa12.51□□□□□ -0.41
TRAF4-216ENST00000586813 MUC21A0A140T8X8 626 aa12.51□□□□□ -0.41
TRAF4-216ENST00000586813 OR5AL1P0C617 328 aa12.51□□□□□ -0.41
TRAF4-216ENST00000586813 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
TRAF4-216ENST00000586813 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
TRAF4-216ENST00000586813 F5H697 171 aa12.5□□□□□ -0.41
TRAF4-216ENST00000586813 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
TRAF4-216ENST00000586813 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
TRAF4-216ENST00000586813 BAGE2Q86Y30 109 aa12.5□□□□□ -0.41
TRAF4-216ENST00000586813 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
TRAF4-216ENST00000586813 VAX2Q9UIW0 290 aa12.5□□□□□ -0.41
TRAF4-216ENST00000586813 A0A1B0GV50 99 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 PFDN1O60925 122 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 PRSS1P07477 247 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 CLPSL2Q6UWE3 100 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
TRAF4-216ENST00000586813 SSTP61278 116 aa12.48□□□□□ -0.41
TRAF4-216ENST00000586813 RBX1P62877 108 aa12.48□□□□□ -0.41
TRAF4-216ENST00000586813 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
TRAF4-216ENST00000586813 DERL1Q9BUN8 251 aa12.48□□□□□ -0.41
TRAF4-216ENST00000586813 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
TRAF4-216ENST00000586813 TRBV25-1A0A075B6N4 114 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 KRTAP26-1Q6PEX3 210 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 C9orf163Q8N9P6 203 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 AP1S3Q96PC3 154 aa12.47□□□□□ -0.41
TRAF4-216ENST00000586813 UMAD1C9J7I0 102 aa12.46□□□□□ -0.41
TRAF4-216ENST00000586813 SMLR1H3BR10 107 aa12.46□□□□□ -0.41
TRAF4-216ENST00000586813 GAGE6Q13070 117 aa12.46□□□□□ -0.41
TRAF4-216ENST00000586813 ZNF345Q14585 488 aa12.46□□□□□ -0.41
TRAF4-216ENST00000586813 KCNRGQ8N5I3 272 aa12.46□□□□□ -0.41
TRAF4-216ENST00000586813 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
TRAF4-216ENST00000586813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-216ENST00000586813 UBR4Q5T4S7 5183 aa12.45□□□□□ -0.42
TRAF4-216ENST00000586813 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
TRAF4-216ENST00000586813 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
TRAF4-216ENST00000586813 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
TRAF4-216ENST00000586813 PANO1I0J062 215 aa12.43□□□□□ -0.42
TRAF4-216ENST00000586813 RPL35P42766 123 aaKnown RBP12.43□□□□□ -0.42
TRAF4-216ENST00000586813 PLA2G2DQ9UNK4 145 aa12.43□□□□□ -0.42
TRAF4-216ENST00000586813 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
TRAF4-216ENST00000586813 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 M0QY20 66 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 MGPP08493 103 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 H2AFB1P0C5Y9 115 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 REG3AQ06141 175 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 SDIM1Q6ZPB5 146 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 CLRN3Q8NCR9 226 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
TRAF4-216ENST00000586813 H7C1H1 209 aa12.4□□□□□ -0.42
TRAF4-216ENST00000586813 IGLC6P0CF74 106 aa12.4□□□□□ -0.42
TRAF4-216ENST00000586813 GZMBP10144 247 aa12.4□□□□□ -0.42
TRAF4-216ENST00000586813 BCL2L11O43521 198 aa12.39□□□□□ -0.43
TRAF4-216ENST00000586813 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
TRAF4-216ENST00000586813 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
TRAF4-216ENST00000586813 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
TRAF4-216ENST00000586813 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
TRAF4-216ENST00000586813 C11orf52Q96A22 123 aa12.39□□□□□ -0.43
TRAF4-216ENST00000586813 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
TRAF4-216ENST00000586813 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
TRAF4-216ENST00000586813 CIRBPQ14011 172 aaKnown RBP12.38□□□□□ -0.43
TRAF4-216ENST00000586813 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
TRAF4-216ENST00000586813 MANBALQ9NQG1 85 aa12.38□□□□□ -0.43
TRAF4-216ENST00000586813 A0A0D9SG52 128 aa12.37□□□□□ -0.43
TRAF4-216ENST00000586813 HMSDA8MTL9 139 aa12.37□□□□□ -0.43
TRAF4-216ENST00000586813 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-216ENST00000586813 RPS20P60866 119 aaKnown RBP12.37□□□□□ -0.43
TRAF4-216ENST00000586813 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
TRAF4-216ENST00000586813 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
TRAF4-216ENST00000586813 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
TRAF4-216ENST00000586813 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
TRAF4-216ENST00000586813 TRAV8-4A0A0B4J246 113 aa12.36□□□□□ -0.43
TRAF4-216ENST00000586813 P01737 135 aa12.36□□□□□ -0.43
TRAF4-216ENST00000586813 CACNG7P62955 275 aa12.36□□□□□ -0.43
TRAF4-216ENST00000586813 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
TRAF4-216ENST00000586813 C19orf71A6NCJ1 209 aa12.35□□□□□ -0.43
TRAF4-216ENST00000586813 CCL20P78556 96 aa12.35□□□□□ -0.43
TRAF4-216ENST00000586813 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
TRAF4-216ENST00000586813 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
TRAF4-216ENST00000586813 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
TRAF4-216ENST00000586813 EIF5AP63241 154 aaKnown RBP12.34□□□□□ -0.43
TRAF4-216ENST00000586813 PGLYRP4Q96LB8 373 aa12.34□□□□□ -0.43
TRAF4-216ENST00000586813 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
TRAF4-216ENST00000586813 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
TRAF4-216ENST00000586813 AP5S1Q9NUS5 200 aa12.33□□□□□ -0.44
TRAF4-216ENST00000586813 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-216ENST00000586813 XKRY2A2RUG3 117 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 F2Z2F3 143 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 SLPIP03973 132 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 GNG4P50150 75 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 RAB5CP51148 216 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 Q6ZRU5 148 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
TRAF4-216ENST00000586813 TRAV1-1A0A0B4J248 108 aa12.31□□□□□ -0.44
TRAF4-216ENST00000586813 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms