RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 M0QY20 66 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 COX19Q49B96 90 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 MRAP2Q96G30 205 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 DNAJC30Q96LL9 226 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
VMP1-203ENST00000586245 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 ELOBQ15370 118 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
VMP1-203ENST00000586245 NEXN-AS1Q8NBZ9 246 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 NIT2Q9NQR4 276 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 Q9UF83 564 aa9.46□□□□□ -0.9
VMP1-203ENST00000586245 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
VMP1-203ENST00000586245 CCL18P55774 89 aa9.45□□□□□ -0.9
VMP1-203ENST00000586245 MRPL51Q4U2R6 128 aaKnown RBP9.45□□□□□ -0.9
VMP1-203ENST00000586245 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
VMP1-203ENST00000586245 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 PPP1R17O96001 155 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 CKS2P33552 79 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
VMP1-203ENST00000586245 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 NCR2O95944 276 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 PPBPP02775 128 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 UBE2D3P61077 147 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 UBE2D2P62837 147 aa9.43□□□□□ -0.9
VMP1-203ENST00000586245 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
VMP1-203ENST00000586245 D6R8Y8 96 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 APCSP02743 223 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 MT-ND6P03923 174 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 ESRGQ1W209 222 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
VMP1-203ENST00000586245 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
VMP1-203ENST00000586245 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
VMP1-203ENST00000586245 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
VMP1-203ENST00000586245 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
VMP1-203ENST00000586245 LGALS9CQ6DKI2 356 aa9.41□□□□□ -0.9
VMP1-203ENST00000586245 TENM2Q9NT68 2774 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 LY6G6CO95867 125 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
VMP1-203ENST00000586245 TIRAPP58753 221 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
VMP1-203ENST00000586245 LINC00588Q9Y4M8 146 aa9.4□□□□□ -0.9
VMP1-203ENST00000586245 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 SCO1O75880 301 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 FABP9Q0Z7S8 132 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 LELP1Q5T871 98 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 NRACQ8N912 160 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
VMP1-203ENST00000586245 TRAPPC1Q9Y5R8 145 aa9.39□□□□□ -0.91
VMP1-203ENST00000586245 LYSTQ99698 3801 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 PHOX2AO14813 284 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 PMCHP20382 165 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 SUMO2P61956 95 aaKnown RBP9.38□□□□□ -0.91
VMP1-203ENST00000586245 KIAA1644Q3SXP7 199 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 DNAH1Q9P2D7 4330 aa9.38□□□□□ -0.91
VMP1-203ENST00000586245 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
VMP1-203ENST00000586245 NPYP01303 97 aa9.37□□□□□ -0.91
VMP1-203ENST00000586245 COTL1Q14019 142 aa9.37□□□□□ -0.91
VMP1-203ENST00000586245 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
VMP1-203ENST00000586245 VPS13DQ5THJ4 4388 aa9.37□□□□□ -0.91
VMP1-203ENST00000586245 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
VMP1-203ENST00000586245 I3L3M4 83 aa9.36□□□□□ -0.91
VMP1-203ENST00000586245 VCYO14598 125 aa9.36□□□□□ -0.91
VMP1-203ENST00000586245 POLR2KP53803 58 aaKnown RBP9.36□□□□□ -0.91
VMP1-203ENST00000586245 UPK3BQ9BT76 320 aa9.36□□□□□ -0.91
VMP1-203ENST00000586245 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
VMP1-203ENST00000586245 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
VMP1-203ENST00000586245 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
VMP1-203ENST00000586245 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
VMP1-203ENST00000586245 TRBV27A0A0K0K1C4 114 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 LCE6AA0A183 80 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 COLCA2A8K830 154 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 AMTP48728 403 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
VMP1-203ENST00000586245 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 SMIM2Q9BVW6 85 aa9.34□□□□□ -0.91
VMP1-203ENST00000586245 TCAPO15273 167 aa9.33□□□□□ -0.92
VMP1-203ENST00000586245 SIVA1O15304 175 aa9.33□□□□□ -0.92
VMP1-203ENST00000586245 RAB5AP20339 215 aa9.33□□□□□ -0.92
VMP1-203ENST00000586245 FCER1GP30273 86 aa9.33□□□□□ -0.92
VMP1-203ENST00000586245 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms