RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 H7C1H1 209 aa11.22□□□□□ -0.61
MBD3-204ENST00000585967 J3QL48 77 aa11.22□□□□□ -0.61
MBD3-204ENST00000585967 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
MBD3-204ENST00000585967 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
MBD3-204ENST00000585967 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
MBD3-204ENST00000585967 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
MBD3-204ENST00000585967 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
MBD3-204ENST00000585967 RAB5CP51148 216 aa11.21□□□□□ -0.61
MBD3-204ENST00000585967 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
MBD3-204ENST00000585967 MIAQ16674 131 aa11.21□□□□□ -0.61
MBD3-204ENST00000585967 TMUB2Q71RG4 321 aa11.21□□□□□ -0.61
MBD3-204ENST00000585967 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
MBD3-204ENST00000585967 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
MBD3-204ENST00000585967 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
MBD3-204ENST00000585967 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 BIN3Q9NQY0 253 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 GNG13Q9P2W3 67 aa11.19□□□□□ -0.62
MBD3-204ENST00000585967 IFNA1P01562 189 aa11.18□□□□□ -0.62
MBD3-204ENST00000585967 HLA-DQA1P01909 254 aa11.18□□□□□ -0.62
MBD3-204ENST00000585967 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
MBD3-204ENST00000585967 VAX2Q9UIW0 290 aa11.18□□□□□ -0.62
MBD3-204ENST00000585967 CACNG7P62955 275 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 DERL1Q9BUN8 251 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 CHAC1Q9BUX1 264 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
MBD3-204ENST00000585967 PDE6DO43924 150 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 MGPP08493 103 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 GNG4P50150 75 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 SSTP61278 116 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
MBD3-204ENST00000585967 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
MBD3-204ENST00000585967 IGHV1-24A0A0C4DH33 117 aa11.15□□□□□ -0.62
MBD3-204ENST00000585967 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
MBD3-204ENST00000585967 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
MBD3-204ENST00000585967 TRGC1P0CF51 173 aa11.15□□□□□ -0.62
MBD3-204ENST00000585967 F2Z2F3 143 aa11.14□□□□□ -0.63
MBD3-204ENST00000585967 P01737 135 aa11.14□□□□□ -0.63
MBD3-204ENST00000585967 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
MBD3-204ENST00000585967 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
MBD3-204ENST00000585967 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
MBD3-204ENST00000585967 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
MBD3-204ENST00000585967 CCL20P78556 96 aa11.13□□□□□ -0.63
MBD3-204ENST00000585967 USP17L23D6RBM5 183 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
MBD3-204ENST00000585967 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 DGAT2L7PQ6IED9 249 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 KIF25-AS1Q9Y6Z4 181 aa11.12□□□□□ -0.63
MBD3-204ENST00000585967 IGLC6P0CF74 106 aa11.11□□□□□ -0.63
MBD3-204ENST00000585967 RBX1P62877 108 aa11.11□□□□□ -0.63
MBD3-204ENST00000585967 GAGE6Q13070 117 aa11.11□□□□□ -0.63
MBD3-204ENST00000585967 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
MBD3-204ENST00000585967 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 M0QY20 66 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 UBE2L6O14933 153 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 DPH3P1Q9H4G8 78 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 MED9Q9NWA0 146 aa11.1□□□□□ -0.63
MBD3-204ENST00000585967 KRTAP29-1A8MX34 341 aaPredicted RBP11.09□□□□□ -0.63
MBD3-204ENST00000585967 GZMBP10144 247 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 SULT1A2P50226 295 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 CLPSL2Q6UWE3 100 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
MBD3-204ENST00000585967 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
MBD3-204ENST00000585967 BCL2P10415 239 aa11.08□□□□□ -0.64
MBD3-204ENST00000585967 REG3AQ06141 175 aa11.08□□□□□ -0.64
MBD3-204ENST00000585967 WDR73Q6P4I2 378 aa11.08□□□□□ -0.64
MBD3-204ENST00000585967 PGLYRP4Q96LB8 373 aa11.08□□□□□ -0.64
MBD3-204ENST00000585967 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
MBD3-204ENST00000585967 NIT2Q9NQR4 276 aa11.07□□□□□ -0.64
MBD3-204ENST00000585967 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
MBD3-204ENST00000585967 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
MBD3-204ENST00000585967 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
MBD3-204ENST00000585967 RAB19A4D1S5 217 aa11.06□□□□□ -0.64
MBD3-204ENST00000585967 NKX2-5P52952 324 aaPredicted RBP11.06□□□□□ -0.64
MBD3-204ENST00000585967 COTL1Q14019 142 aa11.06□□□□□ -0.64
MBD3-204ENST00000585967 SLC51BQ86UW2 128 aa11.06□□□□□ -0.64
MBD3-204ENST00000585967 PRSS1P07477 247 aa11.05□□□□□ -0.64
MBD3-204ENST00000585967 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
MBD3-204ENST00000585967 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
MBD3-204ENST00000585967 NTF3P20783 257 aa11.04□□□□□ -0.64
MBD3-204ENST00000585967 CTRLP40313 264 aa11.04□□□□□ -0.64
MBD3-204ENST00000585967 AMTP48728 403 aa11.04□□□□□ -0.64
MBD3-204ENST00000585967 RPL37AP61513 92 aaKnown RBP11.04□□□□□ -0.64
MBD3-204ENST00000585967 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
MBD3-204ENST00000585967 C9orf62Q8N4C0 152 aa11.04□□□□□ -0.64
MBD3-204ENST00000585967 IGLV10-54A0A075B6I4 117 aa11.03□□□□□ -0.64
MBD3-204ENST00000585967 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
MBD3-204ENST00000585967 OXTP01178 125 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms