RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 HES1Q14469 280 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 SLC50A1Q9BRV3 221 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 PIMREGQ9BSJ6 248 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 TMEM126AQ9H061 195 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 MAST4O15021 2626 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 J3KRW8 73 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
ITGB4-212ENST00000584558 CRYGDP07320 174 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 NDPQ00604 133 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 OTOGQ6ZRI0 2925 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 SAA4P35542 130 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 LINC01587Q99440 93 aa9.61□□□□□ -0.87
ITGB4-212ENST00000584558 IGLV4-69A0A075B6H9 119 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 LGALS9O00182 355 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 ABCA2Q9BZC7 2435 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 Q8N9W7 124 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 AGPAT4-IT1Q9H0P7 198 aa9.6□□□□□ -0.87
ITGB4-212ENST00000584558 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
ITGB4-212ENST00000584558 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
ITGB4-212ENST00000584558 NPFFO15130 113 aa9.59□□□□□ -0.87
ITGB4-212ENST00000584558 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
ITGB4-212ENST00000584558 RPL13AP40429 203 aaKnown RBP9.59□□□□□ -0.87
ITGB4-212ENST00000584558 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
ITGB4-212ENST00000584558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.87
ITGB4-212ENST00000584558 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
ITGB4-212ENST00000584558 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
ITGB4-212ENST00000584558 IGLV11-55A0A075B6I3 123 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV4-30-2A0A087WSY4 118 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 P0DMU3 169 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
ITGB4-212ENST00000584558 MXRA5Q9NR99 2828 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV7-81A0A0B4J1V7 117 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 LOC107984640A0A0U1RRK4 108 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 J3QQQ9 107 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 TP53TG1Q9Y2A0 90 aa9.58□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 TSHBP01222 138 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
ITGB4-212ENST00000584558 PAPPA-AS1Q5QFB9 102 aa9.57□□□□□ -0.88
ITGB4-212ENST00000584558 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
ITGB4-212ENST00000584558 PMVKQ15126 192 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 KLK9Q2XQG4 91 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 KLK9Q9UKQ9 250 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 CUBNO60494 3623 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 TRIAP1O43715 76 aa9.56□□□□□ -0.88
ITGB4-212ENST00000584558 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV3-49A0A0A0MS15 119 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 AMELXQ99217 191 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 NF1P21359 2839 aa9.55□□□□□ -0.88
ITGB4-212ENST00000584558 CTSGP08311 255 aa9.54□□□□□ -0.88
ITGB4-212ENST00000584558 NIPBLQ6KC79 2804 aaeCLIP9.54□□□□□ -0.88
ITGB4-212ENST00000584558 RBAKDNA6NC62 111 aa9.54□□□□□ -0.88
ITGB4-212ENST00000584558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.54□□□□□ -0.88
ITGB4-212ENST00000584558 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
ITGB4-212ENST00000584558 PHLDA3Q9Y5J5 127 aa9.54□□□□□ -0.88
ITGB4-212ENST00000584558 H7C423 109 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-212ENST00000584558 C5orf47Q569G3 176 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 PRR9Q5T870 116 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 CEMP1Q6PRD7 247 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-212ENST00000584558 SETD2Q9BYW2 2564 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-212ENST00000584558 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 IGHV3OR16-10A0A075B7F0 116 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 A0A096LNT2 108 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-212ENST00000584558 DSCR9P59020 149 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
ITGB4-212ENST00000584558 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-212ENST00000584558 IGF1P05019 195 aa9.52□□□□□ -0.89
ITGB4-212ENST00000584558 MSMBP08118 114 aa9.52□□□□□ -0.89
ITGB4-212ENST00000584558 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.89
ITGB4-212ENST00000584558 IGIPA6NJ69 53 aa9.52□□□□□ -0.89
ITGB4-212ENST00000584558 IGHV4-38-2P0DP08 117 aa9.52□□□□□ -0.89
ITGB4-212ENST00000584558 CLEC2BQ92478 149 aa9.52□□□□□ -0.89
ITGB4-212ENST00000584558 TRBV7-7A0A0K0K1E9 115 aa9.51□□□□□ -0.89
ITGB4-212ENST00000584558 ATP6V0E1O15342 81 aa9.51□□□□□ -0.89
ITGB4-212ENST00000584558 NDUFA7O95182 113 aa9.51□□□□□ -0.89
ITGB4-212ENST00000584558 BRD3OSQ6XYD6 125 aa9.51□□□□□ -0.89
ITGB4-212ENST00000584558 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
ITGB4-212ENST00000584558 M0R2P5 195 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms