RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
SKA2-208ENST00000583927 OR2D3Q8NGH3 330 aa6.62□□□□□ -1.35
SKA2-208ENST00000583927 TM2D2Q9BX73 214 aa6.62□□□□□ -1.35
SKA2-208ENST00000583927 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
SKA2-208ENST00000583927 RBFOX3A6NFN3 312 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 SCO1O75880 301 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 IGHV3-30P01768 117 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 IGHV3-33P01772 117 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 SMIM17P0DL12 118 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 IGHV3-30-3P0DP02 117 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 IGHV3-30-5P0DP03 117 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 ZNF56Q15929 161 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 TMEM97Q5BJF2 176 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
SKA2-208ENST00000583927 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
SKA2-208ENST00000583927 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 TRBV6-8A0A0A6YYG3 113 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 H7C1H1 209 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 PSCAO43653 123 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 TRGC1P0CF51 173 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 CTRLP40313 264 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 PKIAP61925 76 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 ELOBQ15370 118 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 DAZ4Q86SG3 579 aaKnown RBP6.6□□□□□ -1.35
SKA2-208ENST00000583927 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.6□□□□□ -1.35
SKA2-208ENST00000583927 NUDT10Q8NFP7 164 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 OCC1Q8TAD7 63 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 NUDT11Q96G61 164 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 DNAJC30Q96LL9 226 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 DAZ3Q9NR90 486 aaKnown RBP6.6□□□□□ -1.35
SKA2-208ENST00000583927 URGCP-MRPS24S4R325 110 aa6.6□□□□□ -1.35
SKA2-208ENST00000583927 K7EN84 100 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 GZMBP10144 247 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 ATRAIDQ6UW56 229 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 LYZL1Q6UWQ5 148 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 FAM231DQ6ZW35 169 aa6.59□□□□□ -1.35
SKA2-208ENST00000583927 A0A087WX48 190 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 MUC21A0A0G2JKD1 596 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 MUC21A0A140T8X8 626 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 F5H697 171 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 M0QY20 66 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 RAB14P61106 215 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 Q8N3U1 123 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 Q8N814 137 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 FRZBQ92765 325 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 RMI2Q96E14 147 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 RPP21Q9H633 154 aaKnown RBP6.58□□□□□ -1.36
SKA2-208ENST00000583927 Q9HAA7 133 aa6.58□□□□□ -1.36
SKA2-208ENST00000583927 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 NTF3P20783 257 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 FOXA3P55318 350 aaPredicted RBP6.57□□□□□ -1.36
SKA2-208ENST00000583927 Q0VG73 95 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 CT83Q5H943 113 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 KCNIP4Q6PIL6 250 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 Q8N1X5 172 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 CLRN3Q8NCR9 226 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 RNASE7Q9H1E1 156 aaKnown RBP6.57□□□□□ -1.36
SKA2-208ENST00000583927 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 FAT1Q14517 4588 aa6.57□□□□□ -1.36
SKA2-208ENST00000583927 SNAPINO95295 136 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 GCSHP23434 173 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
SKA2-208ENST00000583927 IQCJQ1A5X6 159 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 RASL11AQ6T310 242 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 MAPKAPK5-AS1Q8N8E1 139 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 PGLYRP4Q96LB8 373 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
SKA2-208ENST00000583927 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 FAM231BA6NCW3 169 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 A8MWL6 223 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 XGP55808 180 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 SSTP61278 116 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
SKA2-208ENST00000583927 SMDT1Q9H4I9 107 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 NIT2Q9NQR4 276 aa6.55□□□□□ -1.36
SKA2-208ENST00000583927 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 GATCO43716 136 aaKnown RBP6.54□□□□□ -1.36
SKA2-208ENST00000583927 S100A6P06703 90 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 MGPP08493 103 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 SRP19P09132 144 aaKnown RBP6.54□□□□□ -1.36
SKA2-208ENST00000583927 FAM74A3Q4VXF1 159 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 MPV17L2Q567V2 206 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 LINC01551Q86U37 167 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 GTSF1Q8WW33 167 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 SMIM7Q9BQ49 75 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 PRR34Q9NV39 138 aa6.54□□□□□ -1.36
SKA2-208ENST00000583927 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
SKA2-208ENST00000583927 IGHV1-24A0A0C4DH33 117 aa6.53□□□□□ -1.36
SKA2-208ENST00000583927 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
SKA2-208ENST00000583927 TMEM262E9PQX1 116 aa6.53□□□□□ -1.36
SKA2-208ENST00000583927 F8W036 122 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms