RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 A0A087WX48 190 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 TRBV6-8A0A0A6YYG3 113 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 TMEM250H0YL14 139 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 K7EN84 100 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 LYZL1Q6UWQ5 148 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 MAPKAPK5-AS1Q8N8E1 139 aa13□□□□□ -0.33
SREBF1-220ENST00000581707 MGPP08493 103 aa12.99□□□□□ -0.33
SREBF1-220ENST00000581707 KCNIP4Q6PIL6 250 aa12.99□□□□□ -0.33
SREBF1-220ENST00000581707 RNASE7Q9H1E1 156 aaKnown RBP12.99□□□□□ -0.33
SREBF1-220ENST00000581707 CHCHD7Q9BUK0 85 aa12.98□□□□□ -0.33
SREBF1-220ENST00000581707 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
SREBF1-220ENST00000581707 RPP21Q9H633 154 aaKnown RBP12.98□□□□□ -0.33
SREBF1-220ENST00000581707 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
SREBF1-220ENST00000581707 PCLOQ9Y6V0 5065 aa12.98□□□□□ -0.33
SREBF1-220ENST00000581707 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 NTF3P20783 257 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 ELOBQ15370 118 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 Q8N814 137 aa12.97□□□□□ -0.33
SREBF1-220ENST00000581707 APOBP04114 4563 aaKnown RBP12.96□□□□□ -0.33
SREBF1-220ENST00000581707 H7C1H1 209 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 M0QY20 66 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 GCSHP23434 173 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 CTRLP40313 264 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 CEBPGP53567 150 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 KRTAP10-1P60331 282 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 NTN5Q8WTR8 489 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-220ENST00000581707 EIF5A2Q9GZV4 153 aaKnown RBP12.96□□□□□ -0.33
SREBF1-220ENST00000581707 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
SREBF1-220ENST00000581707 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
SREBF1-220ENST00000581707 TMEM97Q5BJF2 176 aa12.95□□□□□ -0.34
SREBF1-220ENST00000581707 SUMO4Q6EEV6 95 aa12.95□□□□□ -0.34
SREBF1-220ENST00000581707 RMI2Q96E14 147 aa12.95□□□□□ -0.34
SREBF1-220ENST00000581707 DNAJC30Q96LL9 226 aa12.95□□□□□ -0.34
SREBF1-220ENST00000581707 Q8N1X5 172 aa12.94□□□□□ -0.34
SREBF1-220ENST00000581707 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
SREBF1-220ENST00000581707 CHCHD5Q9BSY4 110 aa12.94□□□□□ -0.34
SREBF1-220ENST00000581707 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
SREBF1-220ENST00000581707 TWIST1Q15672 202 aa12.93□□□□□ -0.34
SREBF1-220ENST00000581707 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
SREBF1-220ENST00000581707 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
SREBF1-220ENST00000581707 CNFNQ9BYD5 112 aa12.93□□□□□ -0.34
SREBF1-220ENST00000581707 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
SREBF1-220ENST00000581707 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
SREBF1-220ENST00000581707 NDUFS6O75380 124 aaKnown RBP12.92□□□□□ -0.34
SREBF1-220ENST00000581707 PKIAP61925 76 aa12.92□□□□□ -0.34
SREBF1-220ENST00000581707 WFDC2Q14508 124 aa12.92□□□□□ -0.34
SREBF1-220ENST00000581707 RASL11AQ6T310 242 aa12.92□□□□□ -0.34
SREBF1-220ENST00000581707 LECT2O14960 151 aa12.91□□□□□ -0.34
SREBF1-220ENST00000581707 Q0VG73 95 aa12.91□□□□□ -0.34
SREBF1-220ENST00000581707 MPV17L2Q567V2 206 aa12.91□□□□□ -0.34
SREBF1-220ENST00000581707 FAM231DQ6ZW35 169 aa12.91□□□□□ -0.34
SREBF1-220ENST00000581707 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
SREBF1-220ENST00000581707 TRBV25-1A0A075B6N4 114 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 XGP55808 180 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 C15orf54Q8N8G6 183 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 BAALCQ8WXS3 180 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 NIT2Q9NQR4 276 aa12.9□□□□□ -0.34
SREBF1-220ENST00000581707 A8MWL6 223 aa12.89□□□□□ -0.35
SREBF1-220ENST00000581707 ANGP03950 147 aaKnown RBP12.89□□□□□ -0.35
SREBF1-220ENST00000581707 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
SREBF1-220ENST00000581707 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
SREBF1-220ENST00000581707 ZNF727A8MUV8 499 aa12.88□□□□□ -0.35
SREBF1-220ENST00000581707 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
SREBF1-220ENST00000581707 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
SREBF1-220ENST00000581707 ENHOQ6UWT2 76 aa12.88□□□□□ -0.35
SREBF1-220ENST00000581707 Q8N976 141 aa12.88□□□□□ -0.35
SREBF1-220ENST00000581707 CRPP02741 224 aa12.87□□□□□ -0.35
SREBF1-220ENST00000581707 GAGE6Q13070 117 aa12.87□□□□□ -0.35
SREBF1-220ENST00000581707 SMIM15Q7Z3B0 74 aa12.87□□□□□ -0.35
SREBF1-220ENST00000581707 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
SREBF1-220ENST00000581707 PGLYRP4Q96LB8 373 aa12.87□□□□□ -0.35
SREBF1-220ENST00000581707 RBX1P62877 108 aa12.86□□□□□ -0.35
SREBF1-220ENST00000581707 CT83Q5H943 113 aa12.86□□□□□ -0.35
SREBF1-220ENST00000581707 C1orf43Q9BWL3 253 aa12.86□□□□□ -0.35
SREBF1-220ENST00000581707 FOXA3P55318 350 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-220ENST00000581707 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
SREBF1-220ENST00000581707 ABCA13Q86UQ4 5058 aa12.85□□□□□ -0.35
SREBF1-220ENST00000581707 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-220ENST00000581707 FRZBQ92765 325 aa12.84□□□□□ -0.35
SREBF1-220ENST00000581707 TMEM70Q9BUB7 260 aa12.84□□□□□ -0.35
SREBF1-220ENST00000581707 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
SREBF1-220ENST00000581707 TEX261Q6UWH6 196 aa12.83□□□□□ -0.36
SREBF1-220ENST00000581707 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
SREBF1-220ENST00000581707 TMEM243Q9BU79 118 aa12.83□□□□□ -0.36
SREBF1-220ENST00000581707 OSTCQ9NRP0 149 aa12.83□□□□□ -0.36
SREBF1-220ENST00000581707 COTL1Q14019 142 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 MIAQ16674 131 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 LINC00269Q8N2A0 174 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 TSKUQ8WUA8 353 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
SREBF1-220ENST00000581707 EPM2AB3EWF7 344 aa12.81□□□□□ -0.36
SREBF1-220ENST00000581707 TMEM241Q24JQ0 296 aa12.81□□□□□ -0.36
SREBF1-220ENST00000581707 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
SREBF1-220ENST00000581707 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
SREBF1-220ENST00000581707 HIGD1CA8MV81 97 aa12.8□□□□□ -0.36
SREBF1-220ENST00000581707 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms