RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 NTM-AS1Q6ZSK4 140 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 ARPC5O15511 151 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 RPL19P84098 196 aaKnown RBP6.83□□□□□ -1.32
RFFL-209ENST00000581265 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 BAGE2Q86Y30 109 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 BATF3Q9NR55 127 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 KIF25-AS1Q9Y6Z4 181 aa6.83□□□□□ -1.32
RFFL-209ENST00000581265 F5H697 171 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 HLA-DQA1P01909 254 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
RFFL-209ENST00000581265 RBX1P62877 108 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 SDIM1Q6ZPB5 146 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 SFT2D1Q8WV19 159 aa6.82□□□□□ -1.32
RFFL-209ENST00000581265 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
RFFL-209ENST00000581265 MUC21A0A0G2JKD1 596 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 UMAD1C9J7I0 102 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 TMUB2Q71RG4 321 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 DERL1Q9BUN8 251 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
RFFL-209ENST00000581265 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
RFFL-209ENST00000581265 TRBV25-1A0A075B6N4 114 aa6.8□□□□□ -1.32
RFFL-209ENST00000581265 SCO2A0A1W2PP80 73 aa6.8□□□□□ -1.32
RFFL-209ENST00000581265 SMIM17P0DL12 118 aa6.8□□□□□ -1.32
RFFL-209ENST00000581265 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
RFFL-209ENST00000581265 GAGE6Q13070 117 aa6.8□□□□□ -1.32
RFFL-209ENST00000581265 IQCJQ1A5X6 159 aa6.8□□□□□ -1.32
RFFL-209ENST00000581265 PANO1I0J062 215 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 M0QY20 66 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 PFDN1O60925 122 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 SSTP61278 116 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
RFFL-209ENST00000581265 KCNRGQ8N5I3 272 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 FAM213BQ8TBF2 198 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 AP1S3Q96PC3 154 aa6.79□□□□□ -1.32
RFFL-209ENST00000581265 TRAV8-4A0A0B4J246 113 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 A0A1B0GUV1 79 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 P01737 135 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 RPL35P42766 123 aaKnown RBP6.78□□□□□ -1.32
RFFL-209ENST00000581265 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
RFFL-209ENST00000581265 REG3AQ06141 175 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 ZNF345Q14585 488 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 CLPSL2Q6UWE3 100 aa6.78□□□□□ -1.32
RFFL-209ENST00000581265 A0A0D9SG52 128 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 A0A1B0GV50 99 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 H7C1H1 209 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 IGLC6P0CF74 106 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 C20orf203Q8NBC4 194 aa6.77□□□□□ -1.33
RFFL-209ENST00000581265 IGLV10-54A0A075B6I4 117 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 HMSDA8MTL9 139 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 SMLR1H3BR10 107 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 GZMBP10144 247 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 Q6ZRU5 148 aa6.76□□□□□ -1.33
RFFL-209ENST00000581265 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 C19orf71A6NCJ1 209 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 F2Z2F3 143 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 SLPIP03973 132 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 RPS20P60866 119 aaKnown RBP6.75□□□□□ -1.33
RFFL-209ENST00000581265 CACNG7P62955 275 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 FER1L6-AS1Q8NA97 138 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 C11orf52Q96A22 123 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
RFFL-209ENST00000581265 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.74□□□□□ -1.33
RFFL-209ENST00000581265 TRAV1-1A0A0B4J248 108 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 MGPP08493 103 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 NKX2-5P52952 324 aaPredicted RBP6.74□□□□□ -1.33
RFFL-209ENST00000581265 EIF5AP63241 154 aaKnown RBP6.74□□□□□ -1.33
RFFL-209ENST00000581265 CCL20P78556 96 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 RGS21Q2M5E4 152 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 RASL11AQ6T310 242 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 OR2D3Q8NGH3 330 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 TPPP3Q9BW30 176 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 GFRA4Q9GZZ7 299 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 NIT2Q9NQR4 276 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
RFFL-209ENST00000581265 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 A0A087WYN8 130 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 KANTRA0A1W2PQU2 76 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 BCL2L11O43521 198 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 CENPWQ5EE01 88 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 C9orf62Q8N4C0 152 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 SMIM12Q96EX1 92 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 MANBALQ9NQG1 85 aa6.73□□□□□ -1.33
RFFL-209ENST00000581265 GNG13Q9P2W3 67 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms