RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 HSD52Q0P140 79 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 CATR1Q13166 79 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 COL5A1-AS1Q5SY13 56 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 LINC00311Q8N616 119 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 OR8A1Q8NGG7 326 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 RMI2Q96E14 147 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 COMMD3Q9UBI1 195 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 SVEP1Q4LDE5 3571 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 IGHV3-21A0A0B4J1V1 117 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 C19orf71A6NCJ1 209 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 MEIS3P1A6NDR6 274 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 B4DSR2 109 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 FNDC10F2Z333 226 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 FXYD1O00168 92 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 MT-ND6P03923 174 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 COL8A2P25067 703 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 BRS3P32247 399 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 SNRPD3P62318 126 aaKnown RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 RPL18Q07020 188 aaKnown RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 C10orf128Q5T292 105 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 SOSTDC1Q6X4U4 206 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 RNF182Q8N6D2 247 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 C5orf17Q8NAS9 161 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 PFN4Q8NHR9 129 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 C10orf82Q8WW14 230 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 CHCHD7Q9BUK0 85 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 NPCDR1Q9BY65 106 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 OSTCQ9NRP0 149 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 KLK5Q9Y337 293 aaPredicted RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 LINC00588Q9Y4M8 146 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 RTTNQ86VV8 2226 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 ANK2Q01484 3957 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 ARFGEF3Q5TH69 2177 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 IGLV3-9A0A075B6K5 115 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 LECT2O14960 151 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 NCR2O95944 276 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 HLA-DQA1P01909 254 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 MSMBP08118 114 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 CD14P08571 375 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 HIST1H1DP16402 221 aaKnown RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 ATP6V0CP27449 155 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 ZNF93P35789 620 aaPredicted RBP2.45□□□□□ -2.02
NF1-220ENST00000581113 TPPP2P59282 170 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 CCL8P80075 99 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 PABPC1L2AQ5JQF8 200 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 IZUMO2Q6UXV1 221 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 CLDND2Q8NHS1 167 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 SLC25A46Q96AG3 418 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 DPH3Q96FX2 82 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 TMEM191AQ9H0A3 160 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 PRO1933Q9H354 126 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 C11orf1Q9H5F2 150 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 LINC00574Q9H8X3 128 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 SAR1AQ9NR31 198 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 U3KQK5 164 aa2.45□□□□□ -2.02
NF1-220ENST00000581113 HEATR1Q9H583 2144 aaKnown RBP2.44□□□□□ -2.02
NF1-220ENST00000581113 TRBV27A0A0K0K1C4 114 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 TMEM223A0PJW6 202 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 H3BMM0 161 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 SLC25A20O43772 301 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 IGHV1-46P01743 117 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 NPPCP23582 126 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 MPV17P39210 176 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 RPL27AP46776 148 aaKnown RBP2.44□□□□□ -2.02
NF1-220ENST00000581113 PCBD1P61457 104 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 CLLU1Q5K131 121 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 FAM27BQ5VT28 67 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 ZNF705AQ6ZN79 300 aaPredicted RBP2.44□□□□□ -2.02
NF1-220ENST00000581113 PHF5AQ7RTV0 110 aaKnown RBP2.44□□□□□ -2.02
NF1-220ENST00000581113 ARPINQ7Z6K5 226 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 KLF14Q8TD94 323 aaPredicted RBP2.44□□□□□ -2.02
NF1-220ENST00000581113 UBE2WQ96B02 151 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 PRELID3AQ96N28 172 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 ZNF714Q96N38 554 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 MIEN1Q9BRT3 115 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 Q9H521 79 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 FKBP11Q9NYL4 201 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 OR5V1Q9UGF6 321 aa2.44□□□□□ -2.02
NF1-220ENST00000581113 MALRD1Q5VYJ5 2156 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.43□□□□□ -2.023e-22■■■■■ 82.2
NF1-220ENST00000581113 A0A0B4J2C4 111 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 OR2T8A6NH00 312 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 COLCA2A8K830 154 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 NDUFB3O43676 98 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 QRFPP83859 136 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 HIST3H2BBQ8N257 126 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 C3orf56Q8N813 242 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 HIST1H2BLQ99880 126 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 SEC11CQ9BY50 192 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 ZNF355PQ9NSJ1 428 aa2.43□□□□□ -2.02
NF1-220ENST00000581113 TXNL4BQ9NX01 149 aaKnown RBP2.43□□□□□ -2.02
NF1-220ENST00000581113 LSM2Q9Y333 95 aaKnown RBP2.43□□□□□ -2.02
NF1-220ENST00000581113 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
NF1-220ENST00000581113 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms