RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 CACNG7P62955 275 aa17.91■□□□□ 0.46
LINC00271-205ENST00000579339 TOR2AQ5JU69 321 aa17.91■□□□□ 0.46
LINC00271-205ENST00000579339 URGCP-MRPS24S4R325 110 aa17.9■□□□□ 0.46
LINC00271-205ENST00000579339 TMEM250H0YL14 139 aa17.89■□□□□ 0.45
LINC00271-205ENST00000579339 CDPF1Q6NVV7 123 aa17.89■□□□□ 0.45
LINC00271-205ENST00000579339 RPP21Q9H633 154 aaKnown RBP17.89■□□□□ 0.45
LINC00271-205ENST00000579339 F2Z2F3 143 aa17.88■□□□□ 0.45
LINC00271-205ENST00000579339 DNAJC30Q96LL9 226 aa17.88■□□□□ 0.45
LINC00271-205ENST00000579339 KRTAP4-5Q9BYR2 181 aa17.87■□□□□ 0.45
LINC00271-205ENST00000579339 TRBV6-8A0A0A6YYG3 113 aa17.86■□□□□ 0.45
LINC00271-205ENST00000579339 TRAV8-3A0A0A6YYJ7 113 aa17.86■□□□□ 0.45
LINC00271-205ENST00000579339 SUMO4Q6EEV6 95 aa17.86■□□□□ 0.45
LINC00271-205ENST00000579339 MAPKAPK5-AS1Q8N8E1 139 aa17.86■□□□□ 0.45
LINC00271-205ENST00000579339 EIF5A2Q9GZV4 153 aaKnown RBP17.86■□□□□ 0.45
LINC00271-205ENST00000579339 KLK12Q9UKR0 248 aa17.86■□□□□ 0.45
LINC00271-205ENST00000579339 A0A087WX48 190 aa17.85■□□□□ 0.45
LINC00271-205ENST00000579339 NTF3P20783 257 aa17.85■□□□□ 0.45
LINC00271-205ENST00000579339 CTRLP40313 264 aa17.85■□□□□ 0.45
LINC00271-205ENST00000579339 TM2D2Q9BX73 214 aa17.85■□□□□ 0.45
LINC00271-205ENST00000579339 TMEM262E9PQX1 116 aa17.84■□□□□ 0.45
LINC00271-205ENST00000579339 M0QY20 66 aa17.84■□□□□ 0.45
LINC00271-205ENST00000579339 KRTAP10-1P60331 282 aa17.84■□□□□ 0.45
LINC00271-205ENST00000579339 WFDC2Q14508 124 aa17.84■□□□□ 0.45
LINC00271-205ENST00000579339 TRGC1P0CF51 173 aa17.83■□□□□ 0.44
LINC00271-205ENST00000579339 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.83■□□□□ 0.44
LINC00271-205ENST00000579339 FAM210AQ96ND0 272 aa17.83■□□□□ 0.44
LINC00271-205ENST00000579339 KCNIP4Q6PIL6 250 aa17.82■□□□□ 0.44
LINC00271-205ENST00000579339 NTM-AS1Q6ZSK4 140 aa17.82■□□□□ 0.44
LINC00271-205ENST00000579339 Q8N814 137 aa17.82■□□□□ 0.44
LINC00271-205ENST00000579339 UBE2WQ96B02 151 aa17.82■□□□□ 0.44
LINC00271-205ENST00000579339 LECT2O14960 151 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 TWIST1Q15672 202 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 GTSF1Q8WW33 167 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 CHCHD5Q9BSY4 110 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 CHCHD7Q9BUK0 85 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 DPH3P1Q9H4G8 78 aa17.81■□□□□ 0.44
LINC00271-205ENST00000579339 IGLV5-52A0A0A0MRZ9 124 aa17.8■□□□□ 0.44
LINC00271-205ENST00000579339 GATCO43716 136 aaKnown RBP17.8■□□□□ 0.44
LINC00271-205ENST00000579339 MPV17L2Q567V2 206 aa17.8■□□□□ 0.44
LINC00271-205ENST00000579339 SMIM7Q9BQ49 75 aa17.8■□□□□ 0.44
LINC00271-205ENST00000579339 DNAH8Q96JB1 4490 aa17.79■□□□□ 0.44
LINC00271-205ENST00000579339 H7C1H1 209 aa17.79■□□□□ 0.44
LINC00271-205ENST00000579339 WDR73Q6P4I2 378 aa17.79■□□□□ 0.44
LINC00271-205ENST00000579339 CNFNQ9BYD5 112 aa17.79■□□□□ 0.44
LINC00271-205ENST00000579339 IGKV2D-24A0A075B6R9 120 aa17.78■□□□□ 0.44
LINC00271-205ENST00000579339 GCSHP23434 173 aa17.78■□□□□ 0.44
LINC00271-205ENST00000579339 SRP19P09132 144 aaKnown RBP17.77■□□□□ 0.44
LINC00271-205ENST00000579339 ELOBQ15370 118 aa17.77■□□□□ 0.44
LINC00271-205ENST00000579339 RASL11AQ6T310 242 aa17.77■□□□□ 0.44
LINC00271-205ENST00000579339 FAM231DQ6ZW35 169 aa17.77■□□□□ 0.44
LINC00271-205ENST00000579339 C15orf54Q8N8G6 183 aa17.77■□□□□ 0.44
LINC00271-205ENST00000579339 FAT1Q14517 4588 aa17.76■□□□□ 0.43
LINC00271-205ENST00000579339 TMEM97Q5BJF2 176 aa17.76■□□□□ 0.43
LINC00271-205ENST00000579339 NTN5Q8WTR8 489 aaPredicted RBP17.76■□□□□ 0.43
LINC00271-205ENST00000579339 BAALCQ8WXS3 180 aa17.76■□□□□ 0.43
LINC00271-205ENST00000579339 RMI2Q96E14 147 aa17.76■□□□□ 0.43
LINC00271-205ENST00000579339 ZNF727A8MUV8 499 aa17.75■□□□□ 0.43
LINC00271-205ENST00000579339 GAGE6Q13070 117 aa17.75■□□□□ 0.43
LINC00271-205ENST00000579339 Q8N976 141 aa17.75■□□□□ 0.43
LINC00271-205ENST00000579339 LINC01551Q86U37 167 aa17.74■□□□□ 0.43
LINC00271-205ENST00000579339 DEFB104AQ8WTQ1 72 aa17.74■□□□□ 0.43
LINC00271-205ENST00000579339 PGLYRP4Q96LB8 373 aa17.74■□□□□ 0.43
LINC00271-205ENST00000579339 TRBV25-1A0A075B6N4 114 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 TRAV26-2A0A0B4J265 109 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 NDUFS6O75380 124 aaKnown RBP17.73■□□□□ 0.43
LINC00271-205ENST00000579339 ANGP03950 147 aaKnown RBP17.73■□□□□ 0.43
LINC00271-205ENST00000579339 FOXA3P55318 350 aaPredicted RBP17.73■□□□□ 0.43
LINC00271-205ENST00000579339 XGP55808 180 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 ATRAIDQ6UW56 229 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 Q8N1X5 172 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 COX11Q9Y6N1 276 aa17.73■□□□□ 0.43
LINC00271-205ENST00000579339 A8MWL6 223 aa17.72■□□□□ 0.43
LINC00271-205ENST00000579339 ENHOQ6UWT2 76 aa17.72■□□□□ 0.43
LINC00271-205ENST00000579339 NIT2Q9NQR4 276 aa17.72■□□□□ 0.43
LINC00271-205ENST00000579339 IGHV1-24A0A0C4DH33 117 aa17.71■□□□□ 0.43
LINC00271-205ENST00000579339 CRPP02741 224 aa17.71■□□□□ 0.43
LINC00271-205ENST00000579339 IQCJQ1A5X6 159 aa17.71■□□□□ 0.43
LINC00271-205ENST00000579339 GATD1Q8NB37 220 aa17.71■□□□□ 0.43
LINC00271-205ENST00000579339 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-205ENST00000579339 PKIAP61925 76 aa17.7■□□□□ 0.42
LINC00271-205ENST00000579339 RBX1P62877 108 aa17.7■□□□□ 0.42
LINC00271-205ENST00000579339 Q0VG73 95 aa17.7■□□□□ 0.42
LINC00271-205ENST00000579339 CT83Q5H943 113 aa17.7■□□□□ 0.42
LINC00271-205ENST00000579339 TEX261Q6UWH6 196 aa17.7■□□□□ 0.42
LINC00271-205ENST00000579339 HAMPP81172 84 aa17.69■□□□□ 0.42
LINC00271-205ENST00000579339 CLPSL2Q6UWE3 100 aa17.69■□□□□ 0.42
LINC00271-205ENST00000579339 C9JQL5 133 aa17.68■□□□□ 0.42
LINC00271-205ENST00000579339 SMIM15Q7Z3B0 74 aa17.68■□□□□ 0.42
LINC00271-205ENST00000579339 C1orf43Q9BWL3 253 aa17.68■□□□□ 0.42
LINC00271-205ENST00000579339 SRSF3P84103 164 aaKnown RBP17.67■□□□□ 0.42
LINC00271-205ENST00000579339 RPL39LQ96EH5 51 aaKnown RBP17.67■□□□□ 0.42
LINC00271-205ENST00000579339 TSKUQ8WUA8 353 aa17.66■□□□□ 0.42
LINC00271-205ENST00000579339 OSTCQ9NRP0 149 aa17.66■□□□□ 0.42
LINC00271-205ENST00000579339 HIGD1CA8MV81 97 aa17.65■□□□□ 0.42
LINC00271-205ENST00000579339 TMEM243Q9BU79 118 aa17.65■□□□□ 0.42
LINC00271-205ENST00000579339 LINC00269Q8N2A0 174 aa17.64■□□□□ 0.41
LINC00271-205ENST00000579339 COTL1Q14019 142 aa17.63■□□□□ 0.41
LINC00271-205ENST00000579339 TMEM241Q24JQ0 296 aa17.63■□□□□ 0.41
LINC00271-205ENST00000579339 BORCS7Q96B45 105 aa17.63■□□□□ 0.41
LINC00271-205ENST00000579339 RPL23P62829 140 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms