RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 C12orf74Q32Q52 190 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 Q6ZUT4 128 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 EDA2RQ9HAV5 297 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 USF3Q68DE3 2245 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 CRIP2P52943 208 aaPredicted RBP3.44□□□□□ -1.86
NF1-218ENST00000577967 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
NF1-218ENST00000577967 LINC00467Q9BRT7 94 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 TRAV26-1A0A087WT03 109 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 RNASE3P12724 160 aaKnown RBP3.44□□□□□ -1.86
NF1-218ENST00000577967 ODF1Q14990 250 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 NFE4Q86UQ8 179 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 MUSTN1Q8IVN3 82 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 IGLL5B9A064 214 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 RS1O15537 224 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 LAMTOR3Q9UHA4 124 aa3.44□□□□□ -1.86
NF1-218ENST00000577967 NCR3O14931 201 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 LOC100131303A0A0U1RQF7 123 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 A0A1W2PPM0 123 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 TAL2Q16559 108 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 C10orf126Q8N4M7 172 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 K7EP34 96 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 NDUFA7O95182 113 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 PRB2P02812 416 aaPredicted RBP3.43□□□□□ -1.86
NF1-218ENST00000577967 NPSP0C0P6 89 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 RMI2Q96E14 147 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 C16orf95Q9H693 158 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 MALRD1Q5VYJ5 2156 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 COX7A2LO14548 114 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 SPATA12Q7Z6I5 190 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 C20orf203Q8NBC4 194 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 C11orf45Q8TAV5 145 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 PRO1854Q9UHT4 67 aa3.43□□□□□ -1.86
NF1-218ENST00000577967 IGHV4-28A0A0C4DH34 117 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 M0QY20 66 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 TIMM17AQ99595 171 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 CACNA1BQ00975 2339 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 PRSS47A8MTI9 375 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 KLLNB2CW77 178 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 GAGE2EQ4V326 116 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 GAGE2AQ6NT46 116 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 SHISA2Q6UWI4 295 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 GAGE2DQ9UEU5 116 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 SOCS3O14543 225 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 CCL18P55774 89 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 NRACQ8N912 160 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 KLK12Q9UKR0 248 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 POLEQ07864 2286 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
NF1-218ENST00000577967 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 GAGE12HA6NDE8 117 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 LURAP1LQ8IV03 231 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 OVOL2Q9BRP0 275 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 C1orf43Q9BWL3 253 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 SHANK1Q9Y566 2161 aa3.42□□□□□ -1.86
NF1-218ENST00000577967 CCL25O15444 150 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 HERV-K104P63124 156 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 SH2D6Q7Z4S9 175 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 TRAV13-2A0A0B4J235 113 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 E9PLD3 99 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 CHD7Q9P2D1 2997 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 CADP27708 2225 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 TINCRA0A1B0GVN0 87 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 LYRM9A8MSI8 78 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 H3BMG7 143 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 TSHBP01222 138 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 OXLD1Q5BKU9 147 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 CAMK2N2Q96S95 79 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 PKDREJQ9NTG1 2253 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 FXYD2P54710 66 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
NF1-218ENST00000577967 CNOT1A5YKK6 2376 aaKnown RBP3.41□□□□□ -1.86
NF1-218ENST00000577967 SMIM9A6NGZ8 99 aa3.4□□□□□ -1.86
NF1-218ENST00000577967 RETNQ9HD89 108 aa3.4□□□□□ -1.86
NF1-218ENST00000577967 TET2Q6N021 2002 aaPredicted RBP3.4□□□□□ -1.86
NF1-218ENST00000577967 ARHGAP32A7KAX9 2087 aa3.4□□□□□ -1.86
NF1-218ENST00000577967 IGHV1-58A0A0C4DH39 117 aa3.4□□□□□ -1.86
NF1-218ENST00000577967 FAM186AA6NE01 2351 aa3.4□□□□□ -1.86
NF1-218ENST00000577967 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 DEFB105AQ8NG35 78 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 TMEM223A0PJW6 202 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 CFC1P0CG37 223 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 CARD19Q96LW7 228 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 SIGMAR1Q99720 223 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 RP1L1Q8IWN7 2480 aaPredicted RBP3.4□□□□□ -1.87
NF1-218ENST00000577967 A4D1N5 150 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 REG3AQ06141 175 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 ODF3L2Q3SX64 289 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 GTSF1LQ9H1H1 148 aa3.4□□□□□ -1.87
NF1-218ENST00000577967 ACACAQ13085 2346 aa3.39□□□□□ -1.87
NF1-218ENST00000577967 TRBV10-1A0A0K0K1A3 114 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms