RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 PMVKQ15126 192 aa11.02□□□□□ -0.64
CUEDC1-206ENST00000577830 DUX3Q96PT4 197 aa11.02□□□□□ -0.64
CUEDC1-206ENST00000577830 AVPP01185 164 aa11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 TSPEAR-AS2P59090 65 aa11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 IGHV4-4A0A075B6R2 117 aa11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 Q8N1Y9 231 aa11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 ZNF580Q9UK33 172 aa11.02□□□□□ -0.65
CUEDC1-206ENST00000577830 TSPAN13O95857 204 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 TSHBP01222 138 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 CRYGDP07320 174 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 TAL2Q16559 108 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 USMG5Q96IX5 58 aa11.01□□□□□ -0.65
CUEDC1-206ENST00000577830 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
CUEDC1-206ENST00000577830 LENEPQ9Y5L5 61 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 A0A0J9YXV3 536 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 A0A0U1RRA0 63 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 SOCS3O14543 225 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 PROK1P58294 105 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
CUEDC1-206ENST00000577830 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
CUEDC1-206ENST00000577830 SNRPD3P62318 126 aaKnown RBP10.99□□□□□ -0.65
CUEDC1-206ENST00000577830 NOTCH2Q04721 2471 aa10.99□□□□□ -0.65
CUEDC1-206ENST00000577830 J3QQQ9 107 aa10.99□□□□□ -0.65
CUEDC1-206ENST00000577830 IGHG2P01859 326 aa10.99□□□□□ -0.65
CUEDC1-206ENST00000577830 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
CUEDC1-206ENST00000577830 PPP1R17O96001 155 aa10.98□□□□□ -0.65
CUEDC1-206ENST00000577830 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
CUEDC1-206ENST00000577830 IGLV4-69A0A075B6H9 119 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 MSMBP08118 114 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 A0A0J9YY99 117 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 MTORP42345 2549 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 TCL1BO95988 128 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 DEFB112Q30KQ8 113 aa10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
CUEDC1-206ENST00000577830 A8MZ25 164 aa10.96□□□□□ -0.65
CUEDC1-206ENST00000577830 C9JAW5 83 aa10.96□□□□□ -0.65
CUEDC1-206ENST00000577830 NDUFA11Q86Y39 141 aa10.96□□□□□ -0.66
CUEDC1-206ENST00000577830 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 CD28P10747 220 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 LINC00315P59091 139 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 A6NDX4 124 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 CFC1P0CG37 223 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 FOXI1Q12951 378 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 NFE4Q86UQ8 179 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 IGIPA6NJ69 53 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 SPINK8P0C7L1 97 aa10.95□□□□□ -0.66
CUEDC1-206ENST00000577830 FBN2P35556 2912 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 Q9UF83 564 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 IGHV1OR15-1A0A075B7D0 117 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 DEFB131AP59861 70 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 C10orf105Q8TEF2 133 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
CUEDC1-206ENST00000577830 FN1P02751 2386 aaKnown RBP10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 GATA3P23771 443 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 ZNF625Q96I27 306 aaPredicted RBP10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 A8MWV9 139 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 MT-ATP8P03928 68 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 PRO1854Q9UHT4 67 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
CUEDC1-206ENST00000577830 DAND5Q8N907 189 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 CHD6Q8TD26 2715 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 KLLNB2CW77 178 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 B5MCH6 92 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 C1QTNF4Q9BXJ3 329 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 TEX15Q9BXT5 2789 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 COX6B1P14854 86 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 MXRA5Q9NR99 2828 aa10.92□□□□□ -0.66
CUEDC1-206ENST00000577830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 A0A087WW49 117 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 ACANP16112 2415 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 C19orf54Q5BKX5 351 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 M0QY20 66 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
CUEDC1-206ENST00000577830 A0A0J9YX75 114 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 SLURP1P55000 103 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 Q6ZSV7 163 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 NF1P21359 2839 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 LYRM7Q5U5X0 104 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.66
CUEDC1-206ENST00000577830 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.67
CUEDC1-206ENST00000577830 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms