RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 A8MWV9 139 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 UBE2D3P61077 147 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 UBE2D2P62837 147 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
RNF43-202ENST00000577625 MYMXA0A1B0GTQ4 84 aa10.37□□□□□ -0.75
RNF43-202ENST00000577625 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
RNF43-202ENST00000577625 SNCGO76070 127 aa10.37□□□□□ -0.75
RNF43-202ENST00000577625 C9orf47Q6ZRZ4 202 aa10.37□□□□□ -0.75
RNF43-202ENST00000577625 AGPAT4-IT1Q9H0P7 198 aa10.37□□□□□ -0.75
RNF43-202ENST00000577625 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 KIR2DL4Q99706 377 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 TRBV20-1A0A075B6N2 111 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
RNF43-202ENST00000577625 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
RNF43-202ENST00000577625 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
RNF43-202ENST00000577625 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
RNF43-202ENST00000577625 RPL11P62913 178 aaKnown RBP10.35□□□□□ -0.75
RNF43-202ENST00000577625 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
RNF43-202ENST00000577625 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
RNF43-202ENST00000577625 LGALS9O00182 355 aa10.35□□□□□ -0.75
RNF43-202ENST00000577625 PLNP26678 52 aa10.35□□□□□ -0.75
RNF43-202ENST00000577625 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
RNF43-202ENST00000577625 SRSF2Q01130 221 aaKnown RBP10.35□□□□□ -0.75
RNF43-202ENST00000577625 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
RNF43-202ENST00000577625 DEFB136Q30KP8 78 aa10.34□□□□□ -0.75
RNF43-202ENST00000577625 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
RNF43-202ENST00000577625 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
RNF43-202ENST00000577625 SETXQ7Z333 2677 aaKnown RBP10.34□□□□□ -0.75
RNF43-202ENST00000577625 OVOL1O14753 267 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 LY6G6DO95868 133 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 UBE2D1P51668 147 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 M0QXV9 152 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
RNF43-202ENST00000577625 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 TCL1BO95988 128 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 ID1P41134 155 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 HILS1P60008 231 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 LINC00477Q96M19 166 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 TMEM126AQ9H061 195 aa10.32□□□□□ -0.76
RNF43-202ENST00000577625 SORL1Q92673 2214 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 SLURP1P55000 103 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 FLNBO75369 2602 aaKnown RBP10.31□□□□□ -0.76
RNF43-202ENST00000577625 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 Q8N8P6 123 aa10.31□□□□□ -0.76
RNF43-202ENST00000577625 H3BVH4 76 aa10.3□□□□□ -0.76
RNF43-202ENST00000577625 ORM1P02763 201 aa10.3□□□□□ -0.76
RNF43-202ENST00000577625 IGLC6P0CF74 106 aa10.3□□□□□ -0.76
RNF43-202ENST00000577625 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
RNF43-202ENST00000577625 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
RNF43-202ENST00000577625 DEFB1P60022 68 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 LINC01006Q8NI28 216 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
RNF43-202ENST00000577625 FN1P02751 2386 aaKnown RBP10.28□□□□□ -0.76
RNF43-202ENST00000577625 CRLF1O75462 422 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 F8VRH5 84 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 H7C1H1 209 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
RNF43-202ENST00000577625 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 F6UB75 175 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 CD7P09564 240 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 RASL10AQ92737 203 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 CNFNQ9BYD5 112 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
RNF43-202ENST00000577625 K7EQG2 157 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 CD28P10747 220 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 PRR9Q5T870 116 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 NDUFA11Q86Y39 141 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 SPXQ9BT56 116 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 C2CD3Q4AC94 2353 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 SLC25A20O43772 301 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 GAS8-AS1O95177 125 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
RNF43-202ENST00000577625 LAGE3Q14657 143 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
RNF43-202ENST00000577625 SNRPD3P62318 126 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms