RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SMDT1Q9H4I9 107 aa15.83■□□□□ 0.12
SNF8-217ENST00000576353 URGCP-MRPS24S4R325 110 aa15.83■□□□□ 0.12
SNF8-217ENST00000576353 M0QY20 66 aa15.82■□□□□ 0.12
SNF8-217ENST00000576353 LAGE3Q14657 143 aa15.82■□□□□ 0.12
SNF8-217ENST00000576353 TMEM241Q24JQ0 296 aa15.82■□□□□ 0.12
SNF8-217ENST00000576353 DNAJC30Q96LL9 226 aa15.82■□□□□ 0.12
SNF8-217ENST00000576353 SUMO4Q6EEV6 95 aa15.81■□□□□ 0.12
SNF8-217ENST00000576353 SPATA12Q7Z6I5 190 aa15.81■□□□□ 0.12
SNF8-217ENST00000576353 DAZ4Q86SG3 579 aaKnown RBP15.81■□□□□ 0.12
SNF8-217ENST00000576353 DAZ3Q9NR90 486 aaKnown RBP15.81■□□□□ 0.12
SNF8-217ENST00000576353 OSTCQ9NRP0 149 aa15.81■□□□□ 0.12
SNF8-217ENST00000576353 TRBV6-8A0A0A6YYG3 113 aa15.8■□□□□ 0.12
SNF8-217ENST00000576353 C16orf90A8MZG2 172 aa15.8■□□□□ 0.12
SNF8-217ENST00000576353 TMEM97Q5BJF2 176 aa15.8■□□□□ 0.12
SNF8-217ENST00000576353 NIT1Q86X76 327 aa15.8■□□□□ 0.12
SNF8-217ENST00000576353 FOXA3P55318 350 aaPredicted RBP15.79■□□□□ 0.12
SNF8-217ENST00000576353 KCNIP4Q6PIL6 250 aa15.79■□□□□ 0.12
SNF8-217ENST00000576353 SMIM15Q7Z3B0 74 aa15.79■□□□□ 0.12
SNF8-217ENST00000576353 C15orf54Q8N8G6 183 aa15.79■□□□□ 0.12
SNF8-217ENST00000576353 Q9HAA7 133 aa15.79■□□□□ 0.12
SNF8-217ENST00000576353 C9JQL5 133 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 PSCAO43653 123 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 SRSF3P84103 164 aaKnown RBP15.78■□□□□ 0.12
SNF8-217ENST00000576353 RASL11AQ6T310 242 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 Q8N3U1 123 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 PGLYRP4Q96LB8 373 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 CHCHD7Q9BUK0 85 aa15.78■□□□□ 0.12
SNF8-217ENST00000576353 A0A087WX48 190 aa15.77■□□□□ 0.12
SNF8-217ENST00000576353 TSKUQ8WUA8 353 aa15.77■□□□□ 0.12
SNF8-217ENST00000576353 BORCS7Q96B45 105 aa15.77■□□□□ 0.12
SNF8-217ENST00000576353 GFRA4Q9GZZ7 299 aa15.77■□□□□ 0.12
SNF8-217ENST00000576353 PKD1P98161 4303 aa15.77■□□□□ 0.11
SNF8-217ENST00000576353 TRAV8-3A0A0A6YYJ7 113 aa15.76■□□□□ 0.11
SNF8-217ENST00000576353 FAM231BA6NCW3 169 aa15.76■□□□□ 0.11
SNF8-217ENST00000576353 RAB14P61106 215 aa15.76■□□□□ 0.11
SNF8-217ENST00000576353 NAT8Q9UHE5 227 aa15.76■□□□□ 0.11
SNF8-217ENST00000576353 A0A087WTM6 91 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 RPL23P62829 140 aaKnown RBP15.75■□□□□ 0.11
SNF8-217ENST00000576353 ELOBQ15370 118 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 ISOC2Q96AB3 205 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 TM2D2Q9BX73 214 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 NIT2Q9NQR4 276 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 PGPEP1Q9NXJ5 209 aa15.75■□□□□ 0.11
SNF8-217ENST00000576353 TMEM262E9PQX1 116 aa15.74■□□□□ 0.11
SNF8-217ENST00000576353 KRTAP10-2P60368 255 aa15.74■□□□□ 0.11
SNF8-217ENST00000576353 PKIAP61925 76 aa15.74■□□□□ 0.11
SNF8-217ENST00000576353 HIGD1CA8MV81 97 aa15.73■□□□□ 0.11
SNF8-217ENST00000576353 ADIRFQ15847 76 aa15.73■□□□□ 0.11
SNF8-217ENST00000576353 FRZBQ92765 325 aa15.73■□□□□ 0.11
SNF8-217ENST00000576353 CHCHD5Q9BSY4 110 aa15.73■□□□□ 0.11
SNF8-217ENST00000576353 PKHD1P08F94 4074 aa15.73■□□□□ 0.11
SNF8-217ENST00000576353 A0A1B0GUT8 65 aa15.72■□□□□ 0.11
SNF8-217ENST00000576353 V9GYV3 84 aa15.72■□□□□ 0.11
SNF8-217ENST00000576353 NTM-AS1Q6ZSK4 140 aa15.71■□□□□ 0.11
SNF8-217ENST00000576353 KLK12Q9UKR0 248 aa15.71■□□□□ 0.11
SNF8-217ENST00000576353 TRBV25-1A0A075B6N4 114 aa15.7■□□□□ 0.1
SNF8-217ENST00000576353 GATD1Q8NB37 220 aa15.7■□□□□ 0.1
SNF8-217ENST00000576353 RMI2Q96E14 147 aa15.7■□□□□ 0.1
SNF8-217ENST00000576353 COX11Q9Y6N1 276 aa15.7■□□□□ 0.1
SNF8-217ENST00000576353 IQCJQ1A5X6 159 aa15.69■□□□□ 0.1
SNF8-217ENST00000576353 CDPF1Q6NVV7 123 aa15.69■□□□□ 0.1
SNF8-217ENST00000576353 IGHV1-24A0A0C4DH33 117 aa15.68■□□□□ 0.1
SNF8-217ENST00000576353 TRAV26-2A0A0B4J265 109 aa15.67■□□□□ 0.1
SNF8-217ENST00000576353 LRCOL1A6NCL2 159 aa15.67■□□□□ 0.1
SNF8-217ENST00000576353 UBE2WQ96B02 151 aa15.67■□□□□ 0.1
SNF8-217ENST00000576353 NAT8BQ9UHF3 227 aa15.67■□□□□ 0.1
SNF8-217ENST00000576353 DNAH11Q96DT5 4516 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 Q0VG73 95 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 RIGQ13278 110 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 MPV17L2Q567V2 206 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 NUP35Q8NFH5 326 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 TMEM191AQ9H0A3 160 aa15.66■□□□□ 0.1
SNF8-217ENST00000576353 ATRAIDQ6UW56 229 aa15.65■□□□□ 0.1
SNF8-217ENST00000576353 COTL1Q14019 142 aa15.64■□□□□ 0.09
SNF8-217ENST00000576353 ANGP03950 147 aaKnown RBP15.63■□□□□ 0.09
SNF8-217ENST00000576353 GAGE6Q13070 117 aa15.63■□□□□ 0.09
SNF8-217ENST00000576353 TMEM243Q9BU79 118 aa15.63■□□□□ 0.09
SNF8-217ENST00000576353 IGKV2D-24A0A075B6R9 120 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 SMIM27A0A1W2PRY6 76 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 CDK2AP2O75956 126 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 CRPP02741 224 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 RBX1P62877 108 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 CLLU1Q5K131 121 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 Q8N976 141 aa15.62■□□□□ 0.09
SNF8-217ENST00000576353 RPL39LQ96EH5 51 aaKnown RBP15.62■□□□□ 0.09
SNF8-217ENST00000576353 KIAA1109Q2LD37 5005 aa15.61■□□□□ 0.09
SNF8-217ENST00000576353 FUSP35637 526 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNF8-217ENST00000576353 ENHOQ6UWT2 76 aa15.6■□□□□ 0.09
SNF8-217ENST00000576353 Q8N814 137 aa15.6■□□□□ 0.09
SNF8-217ENST00000576353 NTN5Q8WTR8 489 aaPredicted RBP15.6■□□□□ 0.09
SNF8-217ENST00000576353 RAB4AP20338 218 aa15.59■□□□□ 0.09
SNF8-217ENST00000576353 AMTP48728 403 aa15.59■□□□□ 0.09
SNF8-217ENST00000576353 MRAP2Q96G30 205 aa15.59■□□□□ 0.09
SNF8-217ENST00000576353 DYNC1H1Q14204 4646 aaKnown RBP15.59■□□□□ 0.09
SNF8-217ENST00000576353 TRBV6-5A0A0K0K1A5 114 aa15.58■□□□□ 0.08
SNF8-217ENST00000576353 SDHAF1A6NFY7 115 aa15.58■□□□□ 0.08
SNF8-217ENST00000576353 UBE2L6O14933 153 aa15.58■□□□□ 0.08
SNF8-217ENST00000576353 NCR2O95944 276 aa15.58■□□□□ 0.08
SNF8-217ENST00000576353 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.08
SNF8-217ENST00000576353 DEFB104AQ8WTQ1 72 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms