RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 C6orf223Q8N319 242 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 K7EP13 123 aa10.38□□□□□ -0.75
LITAF-217ENST00000575426 PPP1R2P9O14990 202 aa10.38□□□□□ -0.75
LITAF-217ENST00000575426 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
LITAF-217ENST00000575426 M0QY20 66 aa10.37□□□□□ -0.75
LITAF-217ENST00000575426 DNAH10OSP0CZ25 163 aa10.37□□□□□ -0.75
LITAF-217ENST00000575426 BTF3P20290 206 aaKnown RBP10.37□□□□□ -0.75
LITAF-217ENST00000575426 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
LITAF-217ENST00000575426 SMIM27A0A1W2PRY6 76 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
LITAF-217ENST00000575426 COMMD7Q86VX2 200 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 C10orf126Q8N4M7 172 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 NIT2Q9NQR4 276 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
LITAF-217ENST00000575426 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
LITAF-217ENST00000575426 TMEM218A2RU14 115 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 F8W036 122 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 RTL8CO15255 209 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
LITAF-217ENST00000575426 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 KCNIP4Q6PIL6 250 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 TMEM191AQ9H0A3 160 aa10.34□□□□□ -0.75
LITAF-217ENST00000575426 LINC00862A6NCI5 91 aa10.33□□□□□ -0.76
LITAF-217ENST00000575426 NFE4Q86UQ8 179 aa10.33□□□□□ -0.76
LITAF-217ENST00000575426 GATD1Q8NB37 220 aa10.33□□□□□ -0.76
LITAF-217ENST00000575426 FRZBQ92765 325 aa10.33□□□□□ -0.76
LITAF-217ENST00000575426 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
LITAF-217ENST00000575426 TRAV26-2A0A0B4J265 109 aa10.32□□□□□ -0.76
LITAF-217ENST00000575426 A0A1B0GW15 77 aa10.32□□□□□ -0.76
LITAF-217ENST00000575426 S100A8P05109 93 aa10.32□□□□□ -0.76
LITAF-217ENST00000575426 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
LITAF-217ENST00000575426 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
LITAF-217ENST00000575426 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 A0A087WX48 190 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 CAMPP49913 170 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 PKIAP61925 76 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 NIT1Q86X76 327 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
LITAF-217ENST00000575426 IGHV1-24A0A0C4DH33 117 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 RAB4AP20338 218 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
LITAF-217ENST00000575426 AMN1Q8IY45 258 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
LITAF-217ENST00000575426 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
LITAF-217ENST00000575426 HBBP68871 147 aa10.28□□□□□ -0.76
LITAF-217ENST00000575426 COTL1Q14019 142 aa10.28□□□□□ -0.76
LITAF-217ENST00000575426 ELOBQ15370 118 aa10.28□□□□□ -0.76
LITAF-217ENST00000575426 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
LITAF-217ENST00000575426 PPP1R17O96001 155 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 TNP2Q05952 138 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 ATP5L2Q7Z4Y8 100 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 RNF185Q96GF1 192 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
LITAF-217ENST00000575426 IQCJQ1A5X6 159 aa10.26□□□□□ -0.77
LITAF-217ENST00000575426 FAM104BQ5XKR9 115 aa10.26□□□□□ -0.77
LITAF-217ENST00000575426 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
LITAF-217ENST00000575426 Q9HAA7 133 aa10.26□□□□□ -0.77
LITAF-217ENST00000575426 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 UBE2L6O14933 153 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 PSCAO43653 123 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 PMCHP20382 165 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 AMTP48728 403 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 LAGE3Q14657 143 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 Q8N3U1 123 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
LITAF-217ENST00000575426 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 EREGO14944 169 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 NCR2O95944 276 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 GAGE6Q13070 117 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
LITAF-217ENST00000575426 DEFB104AQ8WTQ1 72 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 IMMP2LQ96T52 175 aa10.24□□□□□ -0.77
LITAF-217ENST00000575426 SMKR1H3BMG3 65 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 I3L3M4 83 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
LITAF-217ENST00000575426 CKS2P33552 79 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 ATRAIDQ6UW56 229 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
LITAF-217ENST00000575426 RMI2Q96E14 147 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 BTF3L4Q96K17 158 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
LITAF-217ENST00000575426 GAS8-AS1O95177 125 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 APCSP02743 223 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 S100PP25815 95 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms