RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TRBV27A0A0K0K1C4 114 aa10.74□□□□□ -0.69
SMG6-215ENST00000574501 ANKHD1Q8IWZ3 2542 aaKnown RBP10.74□□□□□ -0.69
SMG6-215ENST00000574501 TRBV12-3P01733 135 aa10.74□□□□□ -0.69
SMG6-215ENST00000574501 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
SMG6-215ENST00000574501 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
SMG6-215ENST00000574501 TNFRSF18Q9Y5U5 241 aa10.74□□□□□ -0.69
SMG6-215ENST00000574501 SPTBN1Q01082 2364 aaKnown RBP10.73□□□□□ -0.69
SMG6-215ENST00000574501 NXPH4O95158 308 aa10.73□□□□□ -0.69
SMG6-215ENST00000574501 FAM19A4Q96LR4 140 aa10.73□□□□□ -0.69
SMG6-215ENST00000574501 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
SMG6-215ENST00000574501 SOCS3O14543 225 aa10.73□□□□□ -0.69
SMG6-215ENST00000574501 ZFP36P26651 326 aaKnown RBP10.73□□□□□ -0.69
SMG6-215ENST00000574501 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
SMG6-215ENST00000574501 NCOR2Q9Y618 2525 aa10.73□□□□□ -0.69
SMG6-215ENST00000574501 TRAV8-3A0A0A6YYJ7 113 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 IGHV3-30-3P0DP02 117 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 LINC01587Q99440 93 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 LITAFQ99732 161 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 MINOS1Q5TGZ0 78 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 MINOS1-NBL1R4GNA1 71 aa10.72□□□□□ -0.69
SMG6-215ENST00000574501 PRRC2AP48634 2157 aaKnown RBP10.71□□□□□ -0.69
SMG6-215ENST00000574501 VPS13CQ709C8 3753 aa10.71□□□□□ -0.69
SMG6-215ENST00000574501 IGHV1-69P01742 117 aa10.71□□□□□ -0.69
SMG6-215ENST00000574501 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.69
SMG6-215ENST00000574501 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 FAM236AA0A1B0GUQ0 79 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 FAM236BA0A1B0GV22 79 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 A8MZ25 164 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 H3BT86 120 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 COX6CP09669 75 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
SMG6-215ENST00000574501 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
SMG6-215ENST00000574501 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
SMG6-215ENST00000574501 TIMM21Q9BVV7 248 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 A0A0J9YX75 114 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 I3L3M4 83 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SMG6-215ENST00000574501 APRG1Q8IVJ8 170 aa10.69□□□□□ -0.7
SMG6-215ENST00000574501 COL12A1Q99715 3063 aa10.68□□□□□ -0.7
SMG6-215ENST00000574501 M0QY20 66 aa10.68□□□□□ -0.7
SMG6-215ENST00000574501 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
SMG6-215ENST00000574501 TRBV6-5A0A0K0K1A5 114 aa10.68□□□□□ -0.7
SMG6-215ENST00000574501 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
SMG6-215ENST00000574501 IGF2RP11717 2491 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 LST1O00453 97 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 SAA4P35542 130 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 FAM240AA0A1B0GVK7 77 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 DAND5Q8N907 189 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 Q8NA96 180 aa10.67□□□□□ -0.7
SMG6-215ENST00000574501 ID1P41134 155 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 RHOHQ15669 191 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 KLLNB2CW77 178 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
SMG6-215ENST00000574501 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 TRAV41A0A0B4J266 112 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 IGKV3-20P01619 116 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 DEFB121Q5J5C9 76 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 IGF2-ASQ6U949 168 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 DUX5Q96PT3 197 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 CACNA1AO00555 2505 aa10.65□□□□□ -0.7
SMG6-215ENST00000574501 CD28P10747 220 aa10.65□□□□□ -0.71
SMG6-215ENST00000574501 EDN2P20800 178 aa10.65□□□□□ -0.71
SMG6-215ENST00000574501 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.71
SMG6-215ENST00000574501 YAE1D1Q9NRH1 226 aa10.65□□□□□ -0.71
SMG6-215ENST00000574501 MIAQ16674 131 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 TMEM61Q8N0U2 210 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 SPANXCQ9NY87 97 aa10.64□□□□□ -0.71
SMG6-215ENST00000574501 NDUFA4O00483 81 aa10.63□□□□□ -0.71
SMG6-215ENST00000574501 LOC107984640A0A0U1RRK4 108 aa10.63□□□□□ -0.71
SMG6-215ENST00000574501 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
SMG6-215ENST00000574501 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
SMG6-215ENST00000574501 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
SMG6-215ENST00000574501 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
SMG6-215ENST00000574501 NBASA2RRP1 2371 aa10.62□□□□□ -0.71
SMG6-215ENST00000574501 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
SMG6-215ENST00000574501 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
SMG6-215ENST00000574501 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
SMG6-215ENST00000574501 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
SMG6-215ENST00000574501 IGHV3-73A0A0B4J1V6 119 aa10.61□□□□□ -0.71
SMG6-215ENST00000574501 MRPS36P82909 103 aaKnown RBP10.61□□□□□ -0.71
SMG6-215ENST00000574501 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
SMG6-215ENST00000574501 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
SMG6-215ENST00000574501 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms