RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PDE6DO43924 150 aa11.46□□□□□ -0.57
SMG6-214ENST00000573827 Q5VSD8 79 aa11.46□□□□□ -0.57
SMG6-214ENST00000573827 Q6ZSA8 131 aa11.46□□□□□ -0.57
SMG6-214ENST00000573827 OR2D3Q8NGH3 330 aa11.46□□□□□ -0.57
SMG6-214ENST00000573827 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
SMG6-214ENST00000573827 M0QY20 66 aa11.45□□□□□ -0.58
SMG6-214ENST00000573827 GNG4P50150 75 aa11.45□□□□□ -0.58
SMG6-214ENST00000573827 SSTP61278 116 aa11.45□□□□□ -0.58
SMG6-214ENST00000573827 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
SMG6-214ENST00000573827 AP1S3Q96PC3 154 aa11.45□□□□□ -0.58
SMG6-214ENST00000573827 TEX46H3BTG2 121 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 SMR3BP02814 79 aaPredicted RBP11.44□□□□□ -0.58
SMG6-214ENST00000573827 RPS20P60866 119 aaKnown RBP11.44□□□□□ -0.58
SMG6-214ENST00000573827 MPV17L2Q567V2 206 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 ENHOQ6UWT2 76 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 MED9Q9NWA0 146 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
SMG6-214ENST00000573827 A0A087WX48 190 aa11.43□□□□□ -0.58
SMG6-214ENST00000573827 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
SMG6-214ENST00000573827 F5H697 171 aa11.42□□□□□ -0.58
SMG6-214ENST00000573827 IFNA1P01562 189 aa11.42□□□□□ -0.58
SMG6-214ENST00000573827 PKHD1L1Q86WI1 4243 aa11.42□□□□□ -0.58
SMG6-214ENST00000573827 K7EN84 100 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 P01737 135 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 CTRLP40313 264 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 CACNG7P62955 275 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 ELOBQ15370 118 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 NUDT10Q8NFP7 164 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 RMI2Q96E14 147 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 DAZAP1Q96EP5 407 aaKnown RBP11.41□□□□□ -0.58
SMG6-214ENST00000573827 NUDT11Q96G61 164 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 CNFNQ9BYD5 112 aa11.41□□□□□ -0.58
SMG6-214ENST00000573827 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
SMG6-214ENST00000573827 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
SMG6-214ENST00000573827 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
SMG6-214ENST00000573827 AKAP14Q86UN6 197 aa11.4□□□□□ -0.58
SMG6-214ENST00000573827 Q8N976 141 aa11.4□□□□□ -0.58
SMG6-214ENST00000573827 FRZBQ92765 325 aa11.4□□□□□ -0.58
SMG6-214ENST00000573827 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
SMG6-214ENST00000573827 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.39□□□□□ -0.59
SMG6-214ENST00000573827 F2Z2F3 143 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 SMIM17P0DL12 118 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 C15orf54Q8N8G6 183 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
SMG6-214ENST00000573827 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 RBX1P62877 108 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 Q0VG73 95 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 WDR73Q6P4I2 378 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
SMG6-214ENST00000573827 hCG_2014768A0A024R1R8 64 aa11.37□□□□□ -0.59
SMG6-214ENST00000573827 NTF3P20783 257 aa11.37□□□□□ -0.59
SMG6-214ENST00000573827 TMEM97Q5BJF2 176 aa11.37□□□□□ -0.59
SMG6-214ENST00000573827 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
SMG6-214ENST00000573827 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
SMG6-214ENST00000573827 BIN3Q9NQY0 253 aa11.37□□□□□ -0.59
SMG6-214ENST00000573827 XKRY2A2RUG3 117 aa11.36□□□□□ -0.59
SMG6-214ENST00000573827 MGPP08493 103 aa11.36□□□□□ -0.59
SMG6-214ENST00000573827 KCNIP4Q6PIL6 250 aa11.36□□□□□ -0.59
SMG6-214ENST00000573827 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
SMG6-214ENST00000573827 RPP21Q9H633 154 aaKnown RBP11.36□□□□□ -0.59
SMG6-214ENST00000573827 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
SMG6-214ENST00000573827 ANGP03950 147 aaKnown RBP11.35□□□□□ -0.59
SMG6-214ENST00000573827 PKIAP61925 76 aa11.35□□□□□ -0.59
SMG6-214ENST00000573827 GAGE6Q13070 117 aa11.35□□□□□ -0.59
SMG6-214ENST00000573827 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
SMG6-214ENST00000573827 DPH3P1Q9H4G8 78 aa11.35□□□□□ -0.59
SMG6-214ENST00000573827 TRBV25-1A0A075B6N4 114 aa11.34□□□□□ -0.59
SMG6-214ENST00000573827 H7C1H1 209 aa11.34□□□□□ -0.59
SMG6-214ENST00000573827 NKX2-5P52952 324 aaPredicted RBP11.34□□□□□ -0.59
SMG6-214ENST00000573827 MIAQ16674 131 aa11.34□□□□□ -0.59
SMG6-214ENST00000573827 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
SMG6-214ENST00000573827 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
SMG6-214ENST00000573827 TRGC1P0CF51 173 aa11.33□□□□□ -0.6
SMG6-214ENST00000573827 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
SMG6-214ENST00000573827 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.33□□□□□ -0.6
SMG6-214ENST00000573827 C20orf203Q8NBC4 194 aa11.33□□□□□ -0.6
SMG6-214ENST00000573827 NIT2Q9NQR4 276 aa11.33□□□□□ -0.6
SMG6-214ENST00000573827 FAM229AH3BQW9 127 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 CRPP02741 224 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 PGLYRP4Q96LB8 373 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
SMG6-214ENST00000573827 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
SMG6-214ENST00000573827 FOXA3P55318 350 aaPredicted RBP11.31□□□□□ -0.6
SMG6-214ENST00000573827 FAM231DQ6ZW35 169 aa11.31□□□□□ -0.6
SMG6-214ENST00000573827 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
SMG6-214ENST00000573827 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
SMG6-214ENST00000573827 A0A1B0GVG6 124 aa11.3□□□□□ -0.6
SMG6-214ENST00000573827 PRSS1P07477 247 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1765.2 ms