RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 MUC21A0A0G2JKD1 596 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 MUC21A0A140T8X8 626 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 PANO1I0J062 215 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 MIAQ16674 131 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 ZNF471Q9BX82 626 aaPredicted RBP14.15□□□□□ -0.14
SNF8-216ENST00000573795 VAX2Q9UIW0 290 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 KIF25-AS1Q9Y6Z4 181 aa14.15□□□□□ -0.14
SNF8-216ENST00000573795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.15□□□□□ -0.14
SNF8-216ENST00000573795 SCO2A0A1W2PP80 73 aa14.14□□□□□ -0.15
SNF8-216ENST00000573795 ARPC5O15511 151 aa14.14□□□□□ -0.15
SNF8-216ENST00000573795 C9orf163Q8N9P6 203 aa14.14□□□□□ -0.15
SNF8-216ENST00000573795 OR5AL1P0C617 328 aa14.13□□□□□ -0.15
SNF8-216ENST00000573795 CLPSL2Q6UWE3 100 aa14.13□□□□□ -0.15
SNF8-216ENST00000573795 RBX1P62877 108 aa14.12□□□□□ -0.15
SNF8-216ENST00000573795 DGAT2L7PQ6IED9 249 aa14.12□□□□□ -0.15
SNF8-216ENST00000573795 S100A9P06702 114 aaKnown RBP14.11□□□□□ -0.15
SNF8-216ENST00000573795 PKIAP61925 76 aa14.11□□□□□ -0.15
SNF8-216ENST00000573795 MBD3L1Q8WWY6 194 aa14.11□□□□□ -0.15
SNF8-216ENST00000573795 PLA2G2DQ9UNK4 145 aa14.11□□□□□ -0.15
SNF8-216ENST00000573795 GAGE6Q13070 117 aa14.1□□□□□ -0.15
SNF8-216ENST00000573795 SPANXN1Q5VSR9 72 aa14.1□□□□□ -0.15
SNF8-216ENST00000573795 BAGE2Q86Y30 109 aa14.1□□□□□ -0.15
SNF8-216ENST00000573795 LINC00269Q8N2A0 174 aa14.1□□□□□ -0.15
SNF8-216ENST00000573795 A0A1B0GV50 99 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 F5H697 171 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 SSTP61278 116 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 TMEM97Q5BJF2 176 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 SFT2D1Q8WV19 159 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 DERL1Q9BUN8 251 aa14.09□□□□□ -0.15
SNF8-216ENST00000573795 TNXBP22105 4242 aa14.08□□□□□ -0.16
SNF8-216ENST00000573795 SMLR1H3BR10 107 aa14.08□□□□□ -0.16
SNF8-216ENST00000573795 SDIM1Q6ZPB5 146 aa14.08□□□□□ -0.16
SNF8-216ENST00000573795 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.08□□□□□ -0.16
SNF8-216ENST00000573795 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
SNF8-216ENST00000573795 IQCJQ1A5X6 159 aa14.07□□□□□ -0.16
SNF8-216ENST00000573795 BATF3Q9NR55 127 aa14.07□□□□□ -0.16
SNF8-216ENST00000573795 TRBV25-1A0A075B6N4 114 aa14.06□□□□□ -0.16
SNF8-216ENST00000573795 MT1HL1P0DM35 61 aa14.06□□□□□ -0.16
SNF8-216ENST00000573795 AP1S3Q96PC3 154 aa14.06□□□□□ -0.16
SNF8-216ENST00000573795 PFDN1O60925 122 aa14.05□□□□□ -0.16
SNF8-216ENST00000573795 CIRBPQ14011 172 aaKnown RBP14.05□□□□□ -0.16
SNF8-216ENST00000573795 KCNRGQ8N5I3 272 aa14.05□□□□□ -0.16
SNF8-216ENST00000573795 IGLV10-54A0A075B6I4 117 aa14.04□□□□□ -0.16
SNF8-216ENST00000573795 M0QY20 66 aa14.04□□□□□ -0.16
SNF8-216ENST00000573795 TMUB2Q71RG4 321 aa14.04□□□□□ -0.16
SNF8-216ENST00000573795 C20orf203Q8NBC4 194 aa14.04□□□□□ -0.16
SNF8-216ENST00000573795 IGHV1-24A0A0C4DH33 117 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 IGLC6P0CF74 106 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 SMIM17P0DL12 118 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 GZMBP10144 247 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
SNF8-216ENST00000573795 CNBPP62633 177 aaKnown RBP14.03□□□□□ -0.16
SNF8-216ENST00000573795 REG3AQ06141 175 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 ZNF345Q14585 488 aa14.03□□□□□ -0.16
SNF8-216ENST00000573795 UMAD1C9J7I0 102 aa14.02□□□□□ -0.17
SNF8-216ENST00000573795 SUMO4Q6EEV6 95 aa14.02□□□□□ -0.17
SNF8-216ENST00000573795 CLRN3Q8NCR9 226 aa14.02□□□□□ -0.17
SNF8-216ENST00000573795 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.17
SNF8-216ENST00000573795 SLPIP03973 132 aa14.01□□□□□ -0.17
SNF8-216ENST00000573795 IGLV4-60A0A075B6I1 120 aa14□□□□□ -0.17
SNF8-216ENST00000573795 MGPP08493 103 aa14□□□□□ -0.17
SNF8-216ENST00000573795 C11orf52Q96A22 123 aa14□□□□□ -0.17
SNF8-216ENST00000573795 H2AFB1P0C5Y9 115 aa13.99□□□□□ -0.17
SNF8-216ENST00000573795 hDV102S1A0JD36 115 aa13.98□□□□□ -0.17
SNF8-216ENST00000573795 CCL20P78556 96 aa13.98□□□□□ -0.17
SNF8-216ENST00000573795 FER1L6-AS1Q8NA97 138 aa13.98□□□□□ -0.17
SNF8-216ENST00000573795 TPPP3Q9BW30 176 aa13.98□□□□□ -0.17
SNF8-216ENST00000573795 LRP2P98164 4655 aa13.98□□□□□ -0.17
SNF8-216ENST00000573795 A0A1B0GUV1 79 aa13.97□□□□□ -0.17
SNF8-216ENST00000573795 C19orf71A6NCJ1 209 aa13.97□□□□□ -0.17
SNF8-216ENST00000573795 CHTF8P0CG12 524 aa13.97□□□□□ -0.17
SNF8-216ENST00000573795 NKX2-5P52952 324 aaPredicted RBP13.97□□□□□ -0.17
SNF8-216ENST00000573795 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
SNF8-216ENST00000573795 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 H7C1H1 209 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 BCL2L11O43521 198 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 P01737 135 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 Q6ZRU5 148 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 TMEM243Q9BU79 118 aa13.96□□□□□ -0.17
SNF8-216ENST00000573795 A0A0D9SG52 128 aa13.95□□□□□ -0.18
SNF8-216ENST00000573795 RGS21Q2M5E4 152 aa13.95□□□□□ -0.18
SNF8-216ENST00000573795 OR2D3Q8NGH3 330 aa13.95□□□□□ -0.18
SNF8-216ENST00000573795 SPACA4Q8TDM5 124 aa13.95□□□□□ -0.18
SNF8-216ENST00000573795 IGHV3-64A0A075B6Q5 118 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 A0A087WYN8 130 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 RAB5CP51148 216 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 CACNG7P62955 275 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 RASL11AQ6T310 242 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 PGLYRP4Q96LB8 373 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 GNG13Q9P2W3 67 aa13.94□□□□□ -0.18
SNF8-216ENST00000573795 RPS20P60866 119 aaKnown RBP13.93□□□□□ -0.18
SNF8-216ENST00000573795 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
SNF8-216ENST00000573795 KANTRA0A1W2PQU2 76 aa13.92□□□□□ -0.18
SNF8-216ENST00000573795 RAB19A4D1S5 217 aa13.92□□□□□ -0.18
SNF8-216ENST00000573795 C15orf56Q8N910 161 aa13.92□□□□□ -0.18
SNF8-216ENST00000573795 RNF185Q96GF1 192 aa13.92□□□□□ -0.18
SNF8-216ENST00000573795 NIT2Q9NQR4 276 aa13.91□□□□□ -0.18
SNF8-216ENST00000573795 RNF213Q63HN8 5207 aa13.9□□□□□ -0.18
SNF8-216ENST00000573795 TRBV20OR9-2A0A075B6H5 130 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms