RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DNAJC30Q96LL9 226 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 TM2D2Q9BX73 214 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 Q9HAA7 133 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 DAZ3Q9NR90 486 aaKnown RBP11.49□□□□□ -0.57
SMG6-212ENST00000573153 WDR73Q6P4I2 378 aa11.48□□□□□ -0.57
SMG6-212ENST00000573153 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
SMG6-212ENST00000573153 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 SMIM17P0DL12 118 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 Q8N814 137 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
SMG6-212ENST00000573153 K7EN84 100 aa11.46□□□□□ -0.57
SMG6-212ENST00000573153 CTRLP40313 264 aa11.46□□□□□ -0.57
SMG6-212ENST00000573153 OCC1Q8TAD7 63 aa11.46□□□□□ -0.57
SMG6-212ENST00000573153 COX11Q9Y6N1 276 aa11.46□□□□□ -0.57
SMG6-212ENST00000573153 URGCP-MRPS24S4R325 110 aa11.46□□□□□ -0.57
SMG6-212ENST00000573153 A0A1B0GVG6 124 aa11.45□□□□□ -0.58
SMG6-212ENST00000573153 F5H697 171 aa11.45□□□□□ -0.58
SMG6-212ENST00000573153 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
SMG6-212ENST00000573153 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
SMG6-212ENST00000573153 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
SMG6-212ENST00000573153 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
SMG6-212ENST00000573153 M0QY20 66 aa11.44□□□□□ -0.58
SMG6-212ENST00000573153 ELOBQ15370 118 aa11.44□□□□□ -0.58
SMG6-212ENST00000573153 ATRAIDQ6UW56 229 aa11.44□□□□□ -0.58
SMG6-212ENST00000573153 RPP21Q9H633 154 aaKnown RBP11.44□□□□□ -0.58
SMG6-212ENST00000573153 HERC1Q15751 4861 aa11.44□□□□□ -0.58
SMG6-212ENST00000573153 A0A087WX48 190 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 H7C1H1 209 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 GCSHP23434 173 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 NKX2-5P52952 324 aaPredicted RBP11.43□□□□□ -0.58
SMG6-212ENST00000573153 SSTP61278 116 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 PKIAP61925 76 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 FAM231DQ6ZW35 169 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 RMI2Q96E14 147 aa11.43□□□□□ -0.58
SMG6-212ENST00000573153 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
SMG6-212ENST00000573153 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
SMG6-212ENST00000573153 NTF3P20783 257 aa11.42□□□□□ -0.58
SMG6-212ENST00000573153 NTM-AS1Q6ZSK4 140 aa11.42□□□□□ -0.58
SMG6-212ENST00000573153 FAM30AQ9NZY2 134 aa11.42□□□□□ -0.58
SMG6-212ENST00000573153 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 HAMPP81172 84 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 KCNIP4Q6PIL6 250 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 KLK12Q9UKR0 248 aa11.41□□□□□ -0.58
SMG6-212ENST00000573153 Q0VG73 95 aa11.4□□□□□ -0.58
SMG6-212ENST00000573153 MGPP08493 103 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 CT83Q5H943 113 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 Q6ZSA8 131 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 FRZBQ92765 325 aa11.39□□□□□ -0.59
SMG6-212ENST00000573153 FOXA3P55318 350 aaPredicted RBP11.38□□□□□ -0.59
SMG6-212ENST00000573153 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
SMG6-212ENST00000573153 GTSF1Q8WW33 167 aa11.38□□□□□ -0.59
SMG6-212ENST00000573153 UBE2WQ96B02 151 aa11.38□□□□□ -0.59
SMG6-212ENST00000573153 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
SMG6-212ENST00000573153 EPM2AB3EWF7 344 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 LECT2O14960 151 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 Q5VSD8 79 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 ENHOQ6UWT2 76 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
SMG6-212ENST00000573153 NIT2Q9NQR4 276 aa11.37□□□□□ -0.59
SMG6-212ENST00000573153 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 IGKV2D-24A0A075B6R9 120 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 A8MWL6 223 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 GATCO43716 136 aaKnown RBP11.36□□□□□ -0.59
SMG6-212ENST00000573153 TWIST1Q15672 202 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 LINC01551Q86U37 167 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 BAALCQ8WXS3 180 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 PRR34Q9NV39 138 aa11.36□□□□□ -0.59
SMG6-212ENST00000573153 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
SMG6-212ENST00000573153 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
SMG6-212ENST00000573153 SMR3BP02814 79 aaPredicted RBP11.34□□□□□ -0.59
SMG6-212ENST00000573153 RBX1P62877 108 aa11.34□□□□□ -0.59
SMG6-212ENST00000573153 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
SMG6-212ENST00000573153 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
SMG6-212ENST00000573153 Q8N976 141 aa11.34□□□□□ -0.59
SMG6-212ENST00000573153 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 ANGP03950 147 aaKnown RBP11.33□□□□□ -0.6
SMG6-212ENST00000573153 CEBPGP53567 150 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 MIAQ16674 131 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
SMG6-212ENST00000573153 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
SMG6-212ENST00000573153 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
SMG6-212ENST00000573153 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
SMG6-212ENST00000573153 CRPP02741 224 aa11.32□□□□□ -0.6
SMG6-212ENST00000573153 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms