RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 MRPS16Q9Y3D3 137 aaKnown RBP15.18■□□□□ 0.02
RAB40B-207ENST00000572603 TRAV26-2A0A0B4J265 109 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 CAMPP49913 170 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 TIRAPP58753 221 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 UBE2D3P61077 147 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 UBE2D2P62837 147 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 HBBP68871 147 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 ATP5L2Q7Z4Y8 100 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 AMN1Q8IY45 258 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 SVBPQ8N300 66 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 ZNRF2Q8NHG8 242 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 TMEM242Q9NWH2 141 aa15.17■□□□□ 0.02
RAB40B-207ENST00000572603 TRBV7-3A0A075B6L6 115 aa15.16■□□□□ 0.02
RAB40B-207ENST00000572603 RPL36AP83881 106 aaKnown RBP15.16■□□□□ 0.02
RAB40B-207ENST00000572603 RASL11AQ6T310 242 aa15.16■□□□□ 0.02
RAB40B-207ENST00000572603 ATP6V0E2Q8NHE4 81 aa15.16■□□□□ 0.02
RAB40B-207ENST00000572603 RPL36ALQ969Q0 106 aaKnown RBP15.16■□□□□ 0.02
RAB40B-207ENST00000572603 UPK3BQ9BT76 320 aa15.16■□□□□ 0.02
RAB40B-207ENST00000572603 RPS10P5Q9NQ39 176 aa15.16■□□□□ 0.02
RAB40B-207ENST00000572603 H7C1H1 209 aa15.15■□□□□ 0.02
RAB40B-207ENST00000572603 RAB4AP20338 218 aa15.15■□□□□ 0.02
RAB40B-207ENST00000572603 GAS8-AS1O95177 125 aa15.14■□□□□ 0.01
RAB40B-207ENST00000572603 SNAPINO95295 136 aa15.14■□□□□ 0.01
RAB40B-207ENST00000572603 BTF3L4Q96K17 158 aa15.14■□□□□ 0.01
RAB40B-207ENST00000572603 FAM104BQ5XKR9 115 aa15.13■□□□□ 0.01
RAB40B-207ENST00000572603 DNAJC30Q96LL9 226 aa15.13■□□□□ 0.01
RAB40B-207ENST00000572603 GTSF1LQ9H1H1 148 aa15.13■□□□□ 0.01
RAB40B-207ENST00000572603 S100A8P05109 93 aa15.12■□□□□ 0.01
RAB40B-207ENST00000572603 FRZBQ92765 325 aa15.12■□□□□ 0.01
RAB40B-207ENST00000572603 RPL39LQ96EH5 51 aaKnown RBP15.12■□□□□ 0.01
RAB40B-207ENST00000572603 NIT2Q9NQR4 276 aa15.12■□□□□ 0.01
RAB40B-207ENST00000572603 TRAV9-1A0A075B6T8 112 aa15.11■□□□□ 0.01
RAB40B-207ENST00000572603 KCNIP4Q6PIL6 250 aa15.11■□□□□ 0.01
RAB40B-207ENST00000572603 ATRAIDQ6UW56 229 aa15.11■□□□□ 0.01
RAB40B-207ENST00000572603 MRPL51Q4U2R6 128 aaKnown RBP15.1■□□□□ 0.01
RAB40B-207ENST00000572603 MRAP2Q96G30 205 aa15.1■□□□□ 0.01
RAB40B-207ENST00000572603 URGCP-MRPS24S4R325 110 aa15.1■□□□□ 0.01
RAB40B-207ENST00000572603 DNAH2Q9P225 4427 aa15.1■□□□□ 0.01
RAB40B-207ENST00000572603 IGHV3-38A0A0C4DH36 116 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 SMKR1H3BMG3 65 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 NCR2O95944 276 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 RPS10P46783 165 aaKnown RBP15.09■□□□□ 0.01
RAB40B-207ENST00000572603 LELP1Q5T871 98 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 WFDC10BQ8IUB3 73 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 TNFRSF18Q9Y5U5 241 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 DNAH10Q8IVF4 4471 aa15.09■□□□□ 0.01
RAB40B-207ENST00000572603 TRBV6-5A0A0K0K1A5 114 aa15.07■□□□□ 0
RAB40B-207ENST00000572603 S100PP25815 95 aa15.07■□□□□ 0
RAB40B-207ENST00000572603 NRACQ8N912 160 aa15.07■□□□□ 0
RAB40B-207ENST00000572603 FRAS1Q86XX4 4008 aa15.07■□□□□ 0
RAB40B-207ENST00000572603 IGLV2-18A0A075B6J9 118 aa15.06■□□□□ 0
RAB40B-207ENST00000572603 OR10J3Q5JRS4 329 aa15.06■□□□□ 0
RAB40B-207ENST00000572603 DAZ4Q86SG3 579 aaKnown RBP15.06■□□□□ 0
RAB40B-207ENST00000572603 Q9H8V8 135 aa15.06■□□□□ 0
RAB40B-207ENST00000572603 DAZ3Q9NR90 486 aaKnown RBP15.06■□□□□ 0
RAB40B-207ENST00000572603 TMEM136Q6ZRR5 245 aa15.05■□□□□ -0
RAB40B-207ENST00000572603 NTM-AS1Q6ZSK4 140 aa15.04■□□□□ -0
RAB40B-207ENST00000572603 KRTAP1-5Q9BYS1 174 aa15.04■□□□□ -0
RAB40B-207ENST00000572603 SIVA1O15304 175 aa15.03■□□□□ -0
RAB40B-207ENST00000572603 Q6ZR54 194 aa15.03■□□□□ -0
RAB40B-207ENST00000572603 YPEL4Q96NS1 127 aa15.03■□□□□ -0
RAB40B-207ENST00000572603 DNAH17Q9UFH2 4485 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 TRBV6-8A0A0A6YYG3 113 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 SDHAF1A6NFY7 115 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 D6R8Y8 96 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 DNAH10OSP0CZ25 163 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 ELOBQ15370 118 aa15.02■□□□□ -0
RAB40B-207ENST00000572603 TRAV8-6A0A0B4J262 113 aa15.01□□□□□ -0.01
RAB40B-207ENST00000572603 NBDYA0A0U1RRE5 68 aa15.01□□□□□ -0.01
RAB40B-207ENST00000572603 TMEM70Q9BUB7 260 aa15.01□□□□□ -0.01
RAB40B-207ENST00000572603 TGIF2-C20orf24A0A0A6YYL0 155 aa15□□□□□ -0.01
RAB40B-207ENST00000572603 CKS2P33552 79 aa15□□□□□ -0.01
RAB40B-207ENST00000572603 POLR2KP53803 58 aaKnown RBP15□□□□□ -0.01
RAB40B-207ENST00000572603 ST20Q9HBF5 79 aa15□□□□□ -0.01
RAB40B-207ENST00000572603 M0R2N4 97 aa14.99□□□□□ -0.01
RAB40B-207ENST00000572603 TMEM97Q5BJF2 176 aa14.99□□□□□ -0.01
RAB40B-207ENST00000572603 Q8N3U1 123 aa14.99□□□□□ -0.01
RAB40B-207ENST00000572603 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-207ENST00000572603 TRBV24-1A0A075B6N3 115 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 PPP1R17O96001 155 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 NPYP01303 97 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 PPBPP02775 128 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 IQCJQ1A5X6 159 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 LINC01556Q5JQF7 62 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 CBLN2Q8IUK8 224 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 DEFB104AQ8WTQ1 72 aa14.98□□□□□ -0.01
RAB40B-207ENST00000572603 TNFRSF6BO95407 300 aa14.97□□□□□ -0.01
RAB40B-207ENST00000572603 SUMO2P61956 95 aaKnown RBP14.97□□□□□ -0.01
RAB40B-207ENST00000572603 NIT1Q86X76 327 aa14.97□□□□□ -0.01
RAB40B-207ENST00000572603 ORMDL3Q8N138 153 aa14.97□□□□□ -0.01
RAB40B-207ENST00000572603 GNB1LQ9BYB4 327 aa14.97□□□□□ -0.01
RAB40B-207ENST00000572603 TRBV27A0A0K0K1C4 114 aa14.96□□□□□ -0.01
RAB40B-207ENST00000572603 HLA-DQA1P01909 254 aa14.96□□□□□ -0.01
RAB40B-207ENST00000572603 COTL1Q14019 142 aa14.96□□□□□ -0.01
RAB40B-207ENST00000572603 IGHV1-24A0A0C4DH33 117 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 PHOX2AO14813 284 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 TSHBP01222 138 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 COX19Q49B96 90 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 TTC32Q5I0X7 151 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 PRELID3AQ96N28 172 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms