RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 NTM-AS1Q6ZSK4 140 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 FER1L6-AS1Q8NA97 138 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 NUDT10Q8NFP7 164 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 NTN5Q8WTR8 489 aaPredicted RBP3.58□□□□□ -1.84
CHD3-212ENST00000570758 BAALCQ8WXS3 180 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 SMIM12Q96EX1 92 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 NUDT11Q96G61 164 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 AP1S3Q96PC3 154 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 TM2D2Q9BX73 214 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 IGKV2D-24A0A075B6R9 120 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 M0QY20 66 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 MGPP08493 103 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 SMIM17P0DL12 118 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 TAGLN2P37802 199 aaKnown RBP3.57□□□□□ -1.84
CHD3-212ENST00000570758 CACNG7P62955 275 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 TOR2AQ5JU69 321 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 SUMO4Q6EEV6 95 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 LYZL1Q6UWQ5 148 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 LYPD6BQ8NI32 183 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 OCC1Q8TAD7 63 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 UBE2WQ96B02 151 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 RNASE7Q9H1E1 156 aaKnown RBP3.57□□□□□ -1.84
CHD3-212ENST00000570758 FAM30AQ9NZY2 134 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 URGCP-MRPS24S4R325 110 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 FAT1Q14517 4588 aa3.57□□□□□ -1.84
CHD3-212ENST00000570758 A0A087WX48 190 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 XKRY2A2RUG3 117 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 F2Z2F3 143 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 NTF3P20783 257 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 CTRLP40313 264 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 BLOC1S1P78537 153 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 GAGE6Q13070 117 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 MPV17L2Q567V2 206 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 WDR73Q6P4I2 378 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 ATRAIDQ6UW56 229 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 ENHOQ6UWT2 76 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 C15orf54Q8N8G6 183 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 Q8N976 141 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 CHCHD7Q9BUK0 85 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 RPP21Q9H633 154 aaKnown RBP3.56□□□□□ -1.84
CHD3-212ENST00000570758 BIN3Q9NQY0 253 aa3.56□□□□□ -1.84
CHD3-212ENST00000570758 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
CHD3-212ENST00000570758 EPM2AB3EWF7 344 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 TMEM250H0YL14 139 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 SMR3BP02814 79 aaPredicted RBP3.55□□□□□ -1.84
CHD3-212ENST00000570758 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
CHD3-212ENST00000570758 TRGC1P0CF51 173 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 FOXA3P55318 350 aaPredicted RBP3.55□□□□□ -1.84
CHD3-212ENST00000570758 RBX1P62877 108 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 ELOBQ15370 118 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 KCNIP4Q6PIL6 250 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 RASL11AQ6T310 242 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 DEFB104AQ8WTQ1 72 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 GTSF1Q8WW33 167 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 RMI2Q96E14 147 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 TMEM70Q9BUB7 260 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 DPH3P1Q9H4G8 78 aa3.55□□□□□ -1.84
CHD3-212ENST00000570758 TRBV25-1A0A075B6N4 114 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 TRAV26-2A0A0B4J265 109 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 IGHV1-24A0A0C4DH33 117 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 H7C1H1 209 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 GATCO43716 136 aaKnown RBP3.54□□□□□ -1.84
CHD3-212ENST00000570758 CEBPGP53567 150 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 Q0VG73 95 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 TWIST1Q15672 202 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 IQCJQ1A5X6 159 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 TMEM97Q5BJF2 176 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 Q5VSD8 79 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 Q6ZSA8 131 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.54□□□□□ -1.84
CHD3-212ENST00000570758 GATD1Q8NB37 220 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 PGLYRP4Q96LB8 373 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 C1orf43Q9BWL3 253 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 NIT2Q9NQR4 276 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 COX11Q9Y6N1 276 aa3.54□□□□□ -1.84
CHD3-212ENST00000570758 IGLV4-60A0A075B6I1 120 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 USP17L23D6RBM5 183 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 CRPP02741 224 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 SRP19P09132 144 aaKnown RBP3.53□□□□□ -1.84
CHD3-212ENST00000570758 INAFM2P0DMQ5 153 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 PKIAP61925 76 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 LINC01551Q86U37 167 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 FRZBQ92765 325 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 RPL39LQ96EH5 51 aaKnown RBP3.53□□□□□ -1.84
CHD3-212ENST00000570758 FAM210AQ96ND0 272 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 SMIM7Q9BQ49 75 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 EIF5A2Q9GZV4 153 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms