RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SH2D1AO60880 128 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 SMIM17P0DL12 118 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
CNOT1-219ENST00000569882 RHOHQ15669 191 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 TDRG1Q3Y452 100 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 COMMD7Q86VX2 200 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 BAGE2Q86Y30 109 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 RASL10AQ92737 203 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 TVP23CQ96ET8 276 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 LINC00479Q96M42 142 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 C18orf15Q96N68 181 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 Q9H8V8 135 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 FAM30AQ9NZY2 134 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
CNOT1-219ENST00000569882 TRAV8-6A0A0B4J262 113 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 GRIFINA4D1Z8 144 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 A8MWV9 139 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 F5H697 171 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 RHODO00212 210 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 PSCAO43653 123 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 PDE6DO43924 150 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 NXPH4O95158 308 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 EVI2AP22794 236 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 GNG4P50150 75 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 ZNF80P51504 273 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-219ENST00000569882 OR10J3Q5JRS4 329 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 ZNF506Q5JVG8 444 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 MBD3L1Q8WWY6 194 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 ZC2HC1AQ96GY0 325 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 MED9Q9NWA0 146 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 MRPS16Q9Y3D3 137 aaKnown RBP3.35□□□□□ -1.87
CNOT1-219ENST00000569882 LY96Q9Y6Y9 160 aa3.35□□□□□ -1.87
CNOT1-219ENST00000569882 K7EQD1 137 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 LTAP01374 205 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 IGLV2-11P01706 119 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 P01737 135 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 ARMS2P0C7Q2 107 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 SULT1A2P50226 295 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 MEF2BQ02080 365 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-219ENST00000569882 ZNF56Q15929 161 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 ESRGQ1W209 222 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 PDZD11Q5EBL8 140 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 CENPWQ5EE01 88 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 UQCC3Q6UW78 93 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 VSIG2Q96IQ7 327 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
CNOT1-219ENST00000569882 IL36BQ9NZH7 164 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 VAX2Q9UIW0 290 aa3.34□□□□□ -1.87
CNOT1-219ENST00000569882 TRAV1-1A0A0B4J248 108 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 TRBV6-1A0A0K0K1D8 114 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 GAGE12JA6NER3 117 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 M0R143 59 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 MGPP08493 103 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 BCL2P10415 239 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 GAGE4Q13068 117 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 GAGE5Q13069 117 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 CLLU1Q5K131 121 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 CFAP126Q5VTH2 177 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 NFE4Q86UQ8 179 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 SLC25A29Q8N8R3 303 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 BORCS7Q96B45 105 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 C9orf85Q96MD7 179 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 AP1S3Q96PC3 154 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 UPK3BQ9BT76 320 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 V9GYY9 64 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
CNOT1-219ENST00000569882 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
CNOT1-219ENST00000569882 CSMD3Q7Z407 3707 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 MUC21A0A0G2JKD1 596 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 LOC100131303A0A0U1RQF7 123 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 MUC21A0A140T8X8 626 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 K7ERU9 68 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 IGHV3-33P01772 117 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 CRYGDP07320 174 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
CNOT1-219ENST00000569882 GATA1P15976 413 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-219ENST00000569882 ERVFC1-1P60608 527 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 CKS1BP61024 79 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 CCL20P78556 96 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 RPL36AP83881 106 aaKnown RBP3.32□□□□□ -1.88
CNOT1-219ENST00000569882 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
CNOT1-219ENST00000569882 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms