RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SMCO4Q9NRQ5 59 aa11.19□□□□□ -0.62
USB1-215ENST00000569252 APLNQ9ULZ1 77 aa11.19□□□□□ -0.62
USB1-215ENST00000569252 RYR1P21817 5038 aa11.19□□□□□ -0.62
USB1-215ENST00000569252 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 GAGE1Q13065 139 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 GAGE4Q13068 117 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 GAGE5Q13069 117 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 COX19Q49B96 90 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
USB1-215ENST00000569252 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 PPP1R17O96001 155 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 RAB4AP20338 218 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 S100A1P23297 94 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 CCL18P55774 89 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 LINC00315P59091 139 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 FAM104BQ5XKR9 115 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
USB1-215ENST00000569252 TRBV7-3A0A075B6L6 115 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 A0A096LPF7 62 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 P0DMU3 169 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 CKS2P33552 79 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 ATRAIDQ6UW56 229 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 UBE2DNLQ8IWF7 75 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 NIT2Q9NQR4 276 aa11.16□□□□□ -0.62
USB1-215ENST00000569252 LOC100131303A0A0U1RQF7 123 aa11.15□□□□□ -0.62
USB1-215ENST00000569252 M0QY20 66 aa11.15□□□□□ -0.62
USB1-215ENST00000569252 ATP6V0E2Q8NHE4 81 aa11.15□□□□□ -0.62
USB1-215ENST00000569252 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
USB1-215ENST00000569252 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
USB1-215ENST00000569252 PPBPP02775 128 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 ELOBQ15370 118 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
USB1-215ENST00000569252 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 NEXN-AS1Q8NBZ9 246 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
USB1-215ENST00000569252 NACAE9PAV3 2078 aa11.12□□□□□ -0.63
USB1-215ENST00000569252 HLA-DQA1P01909 254 aa11.12□□□□□ -0.63
USB1-215ENST00000569252 APCSP02743 223 aa11.12□□□□□ -0.63
USB1-215ENST00000569252 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
USB1-215ENST00000569252 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
USB1-215ENST00000569252 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
USB1-215ENST00000569252 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
USB1-215ENST00000569252 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 TRBV24-1A0A075B6N3 115 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 MT-ND6P03923 174 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 ORMDL3Q8N138 153 aa11.11□□□□□ -0.63
USB1-215ENST00000569252 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 UBE2D3P61077 147 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 UBE2D2P62837 147 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 ESRGQ1W209 222 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 LGALS9CQ6DKI2 356 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 Q9UF83 564 aa11.1□□□□□ -0.63
USB1-215ENST00000569252 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
USB1-215ENST00000569252 D6R8Y8 96 aa11.09□□□□□ -0.63
USB1-215ENST00000569252 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
USB1-215ENST00000569252 FABP9Q0Z7S8 132 aa11.09□□□□□ -0.63
USB1-215ENST00000569252 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
USB1-215ENST00000569252 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
USB1-215ENST00000569252 NCR2O95944 276 aa11.08□□□□□ -0.64
USB1-215ENST00000569252 PMCHP20382 165 aa11.08□□□□□ -0.64
USB1-215ENST00000569252 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 IGHV3-38A0A0C4DH36 116 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 TRBV6-5A0A0K0K1A5 114 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 VCYO14598 125 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 TIRAPP58753 221 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
USB1-215ENST00000569252 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
USB1-215ENST00000569252 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 I3L3M4 83 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 PHOX2AO14813 284 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 COTL1Q14019 142 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 LELP1Q5T871 98 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
USB1-215ENST00000569252 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
USB1-215ENST00000569252 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
USB1-215ENST00000569252 SUMO2P61956 95 aaKnown RBP11.05□□□□□ -0.64
USB1-215ENST00000569252 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
USB1-215ENST00000569252 RPS10P46783 165 aaKnown RBP11.04□□□□□ -0.64
USB1-215ENST00000569252 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
USB1-215ENST00000569252 NRACQ8N912 160 aa11.04□□□□□ -0.64
USB1-215ENST00000569252 KIR2DL4Q99706 377 aa11.04□□□□□ -0.64
USB1-215ENST00000569252 MAP1LC3AQ9H492 121 aa11.04□□□□□ -0.64
USB1-215ENST00000569252 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms