RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
COMMD4-224ENST00000568877 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
COMMD4-224ENST00000568877 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 RAB4AP20338 218 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 ATP6V0E2Q8NHE4 81 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 LYSTQ99698 3801 aa11.56□□□□□ -0.56
COMMD4-224ENST00000568877 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
COMMD4-224ENST00000568877 FRZBQ92765 325 aa11.55□□□□□ -0.56
COMMD4-224ENST00000568877 DNAJC30Q96LL9 226 aa11.55□□□□□ -0.56
COMMD4-224ENST00000568877 URGCP-MRPS24S4R325 110 aa11.55□□□□□ -0.56
COMMD4-224ENST00000568877 UBE2D3P61077 147 aa11.54□□□□□ -0.56
COMMD4-224ENST00000568877 UBE2D2P62837 147 aa11.54□□□□□ -0.56
COMMD4-224ENST00000568877 FAM104BQ5XKR9 115 aa11.54□□□□□ -0.56
COMMD4-224ENST00000568877 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
COMMD4-224ENST00000568877 TNFRSF18Q9Y5U5 241 aa11.54□□□□□ -0.56
COMMD4-224ENST00000568877 TIRAPP58753 221 aa11.53□□□□□ -0.56
COMMD4-224ENST00000568877 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
COMMD4-224ENST00000568877 MRAP2Q96G30 205 aa11.53□□□□□ -0.56
COMMD4-224ENST00000568877 GTSF1LQ9H1H1 148 aa11.53□□□□□ -0.56
COMMD4-224ENST00000568877 MRPS16Q9Y3D3 137 aaKnown RBP11.53□□□□□ -0.56
COMMD4-224ENST00000568877 KMT2CQ8NEZ4 4911 aaKnown RBP11.53□□□□□ -0.56
COMMD4-224ENST00000568877 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
COMMD4-224ENST00000568877 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
COMMD4-224ENST00000568877 UPK3BQ9BT76 320 aa11.51□□□□□ -0.57
COMMD4-224ENST00000568877 GAS8-AS1O95177 125 aa11.5□□□□□ -0.57
COMMD4-224ENST00000568877 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
COMMD4-224ENST00000568877 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-224ENST00000568877 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
COMMD4-224ENST00000568877 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
COMMD4-224ENST00000568877 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
COMMD4-224ENST00000568877 OR10J3Q5JRS4 329 aa11.49□□□□□ -0.57
COMMD4-224ENST00000568877 LELP1Q5T871 98 aa11.49□□□□□ -0.57
COMMD4-224ENST00000568877 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 NCR2O95944 276 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 CKS2P33552 79 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 RPS10P46783 165 aaKnown RBP11.48□□□□□ -0.57
COMMD4-224ENST00000568877 ELOBQ15370 118 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 Q9H8V8 135 aa11.48□□□□□ -0.57
COMMD4-224ENST00000568877 PPP1R17O96001 155 aa11.47□□□□□ -0.57
COMMD4-224ENST00000568877 NRACQ8N912 160 aa11.47□□□□□ -0.57
COMMD4-224ENST00000568877 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
COMMD4-224ENST00000568877 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 D6R8Y8 96 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 PPBPP02775 128 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 COX19Q49B96 90 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 TMEM97Q5BJF2 176 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 SMCO4Q9NRQ5 59 aa11.46□□□□□ -0.57
COMMD4-224ENST00000568877 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 SIVA1O15304 175 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 ORMDL3Q8N138 153 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
COMMD4-224ENST00000568877 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
COMMD4-224ENST00000568877 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
COMMD4-224ENST00000568877 NTM-AS1Q6ZSK4 140 aa11.44□□□□□ -0.58
COMMD4-224ENST00000568877 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
COMMD4-224ENST00000568877 RYR2Q92736 4967 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 APCSP02743 223 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
COMMD4-224ENST00000568877 SUMO2P61956 95 aaKnown RBP11.43□□□□□ -0.58
COMMD4-224ENST00000568877 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 TMEM70Q9BUB7 260 aa11.43□□□□□ -0.58
COMMD4-224ENST00000568877 I3L3M4 83 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 PHOX2AO14813 284 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 COTL1Q14019 142 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 DEFB104AQ8WTQ1 72 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 PRELID3AQ96N28 172 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 C20orf78Q9BR46 151 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 KMT2AQ03164 3969 aa11.42□□□□□ -0.58
COMMD4-224ENST00000568877 TRBV25-1A0A075B6N4 114 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 VCYO14598 125 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 NPYP01303 97 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 MT-ND6P03923 174 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 PMCHP20382 165 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
COMMD4-224ENST00000568877 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
COMMD4-224ENST00000568877 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
COMMD4-224ENST00000568877 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
COMMD4-224ENST00000568877 M0R2N4 97 aa11.4□□□□□ -0.58
COMMD4-224ENST00000568877 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
COMMD4-224ENST00000568877 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
COMMD4-224ENST00000568877 KIAA1644Q3SXP7 199 aa11.39□□□□□ -0.59
COMMD4-224ENST00000568877 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms