RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 ERG28Q9UKR5 140 aa15.97■□□□□ 0.15
DENND4A-208ENST00000568515 IGHV3-64A0A075B6Q5 118 aa15.96■□□□□ 0.15
DENND4A-208ENST00000568515 IGHV4-61A0A0C4DH41 118 aa15.96■□□□□ 0.15
DENND4A-208ENST00000568515 RHODO00212 210 aa15.96■□□□□ 0.15
DENND4A-208ENST00000568515 SLC25A20O43772 301 aa15.96■□□□□ 0.15
DENND4A-208ENST00000568515 MUSTN1Q8IVN3 82 aa15.96■□□□□ 0.15
DENND4A-208ENST00000568515 TRAV26-1A0A087WT03 109 aa15.95■□□□□ 0.14
DENND4A-208ENST00000568515 A0A0B4J2C4 111 aa15.95■□□□□ 0.14
DENND4A-208ENST00000568515 C9JAW5 83 aa15.95■□□□□ 0.14
DENND4A-208ENST00000568515 A0A0J9YX75 114 aa15.94■□□□□ 0.14
DENND4A-208ENST00000568515 A0A0J9YXV3 536 aa15.94■□□□□ 0.14
DENND4A-208ENST00000568515 CFHR3Q02985 330 aa15.94■□□□□ 0.14
DENND4A-208ENST00000568515 H7C2G1 150 aa15.94■□□□□ 0.14
DENND4A-208ENST00000568515 I3L3M4 83 aa15.94■□□□□ 0.14
DENND4A-208ENST00000568515 IGHV1OR15-1A0A075B7D0 117 aa15.93■□□□□ 0.14
DENND4A-208ENST00000568515 M0QXV9 152 aa15.93■□□□□ 0.14
DENND4A-208ENST00000568515 IGLV4-3A0A075B6K6 122 aa15.93■□□□□ 0.14
DENND4A-208ENST00000568515 TMEM262E9PQX1 116 aa15.93■□□□□ 0.14
DENND4A-208ENST00000568515 CLUHP3Q96NS8 147 aa15.93■□□□□ 0.14
DENND4A-208ENST00000568515 C19orf84I3L1E1 186 aa15.92■□□□□ 0.14
DENND4A-208ENST00000568515 PIMREGQ9BSJ6 248 aa15.92■□□□□ 0.14
DENND4A-208ENST00000568515 M0R2P5 195 aa15.91■□□□□ 0.14
DENND4A-208ENST00000568515 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.91■□□□□ 0.14
DENND4A-208ENST00000568515 SNRPD3P62318 126 aaKnown RBP15.91■□□□□ 0.14
DENND4A-208ENST00000568515 SPINK13Q1W4C9 94 aa15.91■□□□□ 0.14
DENND4A-208ENST00000568515 ZNF580Q9UK33 172 aa15.91■□□□□ 0.14
DENND4A-208ENST00000568515 A0A0J9YXY3 114 aa15.9■□□□□ 0.14
DENND4A-208ENST00000568515 TMEM95Q3KNT9 176 aa15.89■□□□□ 0.13
DENND4A-208ENST00000568515 Q1RN00 199 aa15.88■□□□□ 0.13
DENND4A-208ENST00000568515 K7EQG2 157 aa15.88■□□□□ 0.13
DENND4A-208ENST00000568515 ELANEP08246 267 aa15.88■□□□□ 0.13
DENND4A-208ENST00000568515 IGHV3-30-3P0DP02 117 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 Q5PR19 223 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 SPXQ9BT56 116 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 PSMB8P28062 276 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 ATXN8Q156A1 80 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 C10orf105Q8TEF2 133 aa15.87■□□□□ 0.13
DENND4A-208ENST00000568515 VPS13CQ709C8 3753 aa15.86■□□□□ 0.13
DENND4A-208ENST00000568515 LINC01620Q4KN68 170 aa15.85■□□□□ 0.13
DENND4A-208ENST00000568515 ADARB2-AS1A8MUL3 147 aa15.85■□□□□ 0.13
DENND4A-208ENST00000568515 ZFAND6Q6FIF0 208 aa15.85■□□□□ 0.13
DENND4A-208ENST00000568515 TIMM21Q9BVV7 248 aa15.85■□□□□ 0.13
DENND4A-208ENST00000568515 PYGO1Q9Y3Y4 419 aa15.85■□□□□ 0.13
DENND4A-208ENST00000568515 RNF183Q96D59 192 aa15.84■□□□□ 0.13
DENND4A-208ENST00000568515 CD28P10747 220 aa15.84■□□□□ 0.13
DENND4A-208ENST00000568515 NTN5Q8WTR8 489 aaPredicted RBP15.84■□□□□ 0.13
DENND4A-208ENST00000568515 FAM104AQ969W3 186 aa15.84■□□□□ 0.13
DENND4A-208ENST00000568515 LITAFQ99732 161 aa15.84■□□□□ 0.13
DENND4A-208ENST00000568515 TRGV11A0A075B6L2 103 aa15.83■□□□□ 0.13
DENND4A-208ENST00000568515 TRBV30A0A0K0K1B3 111 aa15.83■□□□□ 0.12
DENND4A-208ENST00000568515 MRPS36P82909 103 aaKnown RBP15.83■□□□□ 0.12
DENND4A-208ENST00000568515 C10orf99Q6UWK7 81 aa15.83■□□□□ 0.12
DENND4A-208ENST00000568515 TEX29Q8N6K0 151 aa15.83■□□□□ 0.12
DENND4A-208ENST00000568515 CITED1Q99966 193 aa15.83■□□□□ 0.12
DENND4A-208ENST00000568515 BEX4Q9NWD9 120 aaPredicted RBP15.83■□□□□ 0.12
DENND4A-208ENST00000568515 LY6DQ14210 128 aa15.82■□□□□ 0.12
DENND4A-208ENST00000568515 TRIAP1O43715 76 aa15.82■□□□□ 0.12
DENND4A-208ENST00000568515 PRRC2AP48634 2157 aaKnown RBP15.82■□□□□ 0.12
DENND4A-208ENST00000568515 SORL1Q92673 2214 aa15.82■□□□□ 0.12
DENND4A-208ENST00000568515 TRAV8-3A0A0A6YYJ7 113 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 PRSS2P07478 247 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 MSMBP08118 114 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 LINC01600Q96MT4 127 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.81■□□□□ 0.122e-11■■■■■ 43
DENND4A-208ENST00000568515 COL12A1Q99715 3063 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 DOPEY2Q9Y3R5 2298 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 IGHV3-73A0A0B4J1V6 119 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 CEMP1Q6PRD7 247 aaPredicted RBP15.81■□□□□ 0.12
DENND4A-208ENST00000568515 ANAPC13Q9BS18 74 aa15.81■□□□□ 0.12
DENND4A-208ENST00000568515 IGHV4-30-2A0A087WSY4 118 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 AVPP01185 164 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 EDA2RQ9HAV5 297 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 TRBV10-2A0A0K0K1G8 114 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 RNF152Q8N8N0 203 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 CCL19Q99731 98 aa15.8■□□□□ 0.12
DENND4A-208ENST00000568515 IGHV1-58A0A0C4DH39 117 aa15.79■□□□□ 0.12
DENND4A-208ENST00000568515 PROK1P58294 105 aa15.79■□□□□ 0.12
DENND4A-208ENST00000568515 ADAMTSL4-AS1Q5T5F5 129 aa15.79■□□□□ 0.12
DENND4A-208ENST00000568515 SYNJ2BPP57105 145 aa15.79■□□□□ 0.12
DENND4A-208ENST00000568515 SPANXDQ9BXN6 97 aa15.78■□□□□ 0.12
DENND4A-208ENST00000568515 SPANXCQ9NY87 97 aa15.78■□□□□ 0.12
DENND4A-208ENST00000568515 RBMY1A1P0DJD3 496 aaKnown RBP15.78■□□□□ 0.12
DENND4A-208ENST00000568515 RBMY1CP0DJD4 496 aa15.78■□□□□ 0.12
DENND4A-208ENST00000568515 RPL13AP40429 203 aaKnown RBP15.78■□□□□ 0.12
DENND4A-208ENST00000568515 RBMY1FQ15415 496 aaKnown RBP15.78■□□□□ 0.12
DENND4A-208ENST00000568515 RNASE13Q5GAN3 156 aaKnown RBP15.78■□□□□ 0.12
DENND4A-208ENST00000568515 NDUFA12Q9UI09 145 aa15.78■□□□□ 0.12
DENND4A-208ENST00000568515 TEX49A0A1B0GTD5 131 aa15.77■□□□□ 0.11
DENND4A-208ENST00000568515 HTN1P15515 57 aa15.77■□□□□ 0.11
DENND4A-208ENST00000568515 TNFRSF18Q9Y5U5 241 aa15.77■□□□□ 0.11
DENND4A-208ENST00000568515 ICOSQ9Y6W8 199 aa15.76■□□□□ 0.11
DENND4A-208ENST00000568515 SNCGO76070 127 aa15.76■□□□□ 0.11
DENND4A-208ENST00000568515 GATA3P23771 443 aa15.76■□□□□ 0.11
DENND4A-208ENST00000568515 IGHV4-59P01825 116 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 ATP5J2P56134 94 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 VSIG2Q96IQ7 327 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 TMEM89A2RUT3 159 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 GNLYP22749 145 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 MIAQ16674 131 aa15.75■□□□□ 0.11
DENND4A-208ENST00000568515 DUX5Q96PT3 197 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms