RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 TCTEX1D4Q5JR98 221 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 CFAP126Q5VTH2 177 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 DUX3Q96PT4 197 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 TTTY13Q9BZ97 58 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 GEMIN7Q9H840 131 aaKnown RBP5.67□□□□□ -1.5
ATXN3-250ENST00000568290 MUC6Q6W4X9 2439 aa5.67□□□□□ -1.5
ATXN3-250ENST00000568290 CACNA1BQ00975 2339 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 TSPAN13O95857 204 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 CFC1BP0CG36 223 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 CFC1P0CG37 223 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 SRD5A1P18405 259 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 SYNJ2BPP57105 145 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 MRPS36P82909 103 aaKnown RBP5.66□□□□□ -1.5
ATXN3-250ENST00000568290 WFDC2Q14508 124 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 Q1RN00 199 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 C4orf3Q8WVX3 66 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 PPDPFQ9H3Y8 114 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
ATXN3-250ENST00000568290 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 TRBV30A0A0K0K1B3 111 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 TSHBP01222 138 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 IGHV4-59P01825 116 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 ZNF22P17026 224 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-250ENST00000568290 TIRAPP58753 221 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 HERVK_113P63121 156 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 MORN3Q6PF18 240 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-250ENST00000568290 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 Q8N2B8 174 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 AMELXQ99217 191 aa5.65□□□□□ -1.5
ATXN3-250ENST00000568290 TSSC4Q9Y5U2 329 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-250ENST00000568290 COL6A3P12111 3177 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 IGLV4-3A0A075B6K6 122 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 H3BMM0 161 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 AZU1P20160 251 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 RPL13AP40429 203 aaKnown RBP5.64□□□□□ -1.51
ATXN3-250ENST00000568290 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
ATXN3-250ENST00000568290 SBSPONQ8IVN8 264 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 LINC01600Q96MT4 127 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 LINC01587Q99440 93 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
ATXN3-250ENST00000568290 ARHGAP32A7KAX9 2087 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 DMDP11532 3685 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 H3BT86 120 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 H7C423 109 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 IGHV3-53P01767 116 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 DEFB131AP59861 70 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 HERV-K104P63124 156 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 DAZ2Q13117 558 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 BEAN1Q3B7T3 259 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 AMTNQ6UX39 209 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 DAZ4Q86SG3 579 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 KLHL30-AS1Q8NEE0 82 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 ZNRF2Q8NHG8 242 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 OVOL2Q9BRP0 275 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 DAZ3Q9NR90 486 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 NDUFA12Q9UI09 145 aa5.63□□□□□ -1.51
ATXN3-250ENST00000568290 CSDC2Q9Y534 153 aaKnown RBP5.63□□□□□ -1.51
ATXN3-250ENST00000568290 TRAV12-2A0A075B6T6 113 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 A4D1N5 150 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 RS1O15537 224 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 SLC25A20O43772 301 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 FSHBP01225 129 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 IGKV3-20P01619 116 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 IGHV3-30-3P0DP02 117 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 MIAQ16674 131 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 Q6ZQT7 251 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 STHQ8IWL8 128 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 ZNF702PQ9H963 129 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 AKAP13Q12802 2813 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 WDFY4Q6ZS81 3184 aa5.62□□□□□ -1.51
ATXN3-250ENST00000568290 TRAV4A0A0B4J268 109 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 TRBV10-2A0A0K0K1G8 114 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 IGHV3-33P01772 117 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 ACYP1P07311 99 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 PRSS2P07478 247 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 ZFAND6Q6FIF0 208 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 SH2D6Q7Z4S9 175 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 MUSTN1Q8IVN3 82 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 ANKRD29Q8N6D5 301 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 ZNF418Q8TF45 676 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-250ENST00000568290 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
ATXN3-250ENST00000568290 VSIG2Q96IQ7 327 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 FAM110AQ9BQ89 295 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 CEP295Q9C0D2 2601 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 GTSF1LQ9H1H1 148 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 JPT2Q9H910 190 aa5.61□□□□□ -1.51
ATXN3-250ENST00000568290 CELSR3Q9NYQ7 3312 aa5.6□□□□□ -1.51
ATXN3-250ENST00000568290 UBE2L6O14933 153 aa5.6□□□□□ -1.51
ATXN3-250ENST00000568290 NDUFA1O15239 70 aa5.6□□□□□ -1.51
ATXN3-250ENST00000568290 SNCGO76070 127 aa5.6□□□□□ -1.51
ATXN3-250ENST00000568290 TCL1BO95988 128 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms