RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
HDGFL3-205ENST00000568129 SMDT1Q9H4I9 107 aa5.46□□□□□ -1.54
HDGFL3-205ENST00000568129 RPP21Q9H633 154 aaKnown RBP5.46□□□□□ -1.54
HDGFL3-205ENST00000568129 DAZ3Q9NR90 486 aaKnown RBP5.46□□□□□ -1.54
HDGFL3-205ENST00000568129 TRAV8-3A0A0A6YYJ7 113 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 FAM231BA6NCW3 169 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 IGHV3-30P01768 117 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 IGHV3-33P01772 117 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 SMIM17P0DL12 118 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 IGHV3-30-3P0DP02 117 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 IGHV3-30-5P0DP03 117 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 ZNF56Q15929 161 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 TOR2AQ5JU69 321 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 LINC01551Q86U37 167 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 Q8N3U1 123 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 GTSF1Q8WW33 167 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 FRZBQ92765 325 aa5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 RNASE7Q9H1E1 156 aaKnown RBP5.45□□□□□ -1.54
HDGFL3-205ENST00000568129 H7C1H1 209 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 EREGO14944 169 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 TRGC1P0CF51 173 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 FAM74A3Q4VXF1 159 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 TM2D2Q9BX73 214 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 EIF5A2Q9GZV4 153 aaKnown RBP5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 GFRA4Q9GZZ7 299 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 DPH3P1Q9H4G8 78 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 OSTCQ9NRP0 149 aa5.44□□□□□ -1.54
HDGFL3-205ENST00000568129 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 A8MWL6 223 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 F5H697 171 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 GATCO43716 136 aaKnown RBP5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 PKIAP61925 76 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 ELOBQ15370 118 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 IQCJQ1A5X6 159 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 SUMO4Q6EEV6 95 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 PGLYRP4Q96LB8 373 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 SMIM7Q9BQ49 75 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 NIT2Q9NQR4 276 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 COX11Q9Y6N1 276 aa5.43□□□□□ -1.54
HDGFL3-205ENST00000568129 ZNF727A8MUV8 499 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 C9JQL5 133 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 SSTP61278 116 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 RASL11AQ6T310 242 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 Q8N814 137 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 TSKUQ8WUA8 353 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 TPPP3Q9BW30 176 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 PRR34Q9NV39 138 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 V9GYV3 84 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
HDGFL3-205ENST00000568129 A0A1B0GUV1 79 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 XGP55808 180 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 SRSF3P84103 164 aaKnown RBP5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 Q0VG73 95 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 TWIST1Q15672 202 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 TMEM241Q24JQ0 296 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 ENHOQ6UWT2 76 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 GATD1Q8NB37 220 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 ISOC2Q96AB3 205 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 Q9HAA7 133 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 KLK12Q9UKR0 248 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 URGCP-MRPS24S4R325 110 aa5.41□□□□□ -1.54
HDGFL3-205ENST00000568129 TRBV25-1A0A075B6N4 114 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 A0A087WX48 190 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 PSCAO43653 123 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 KRTAP10-1P60331 282 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 RPL23P62829 140 aaKnown RBP5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 WFDC2Q14508 124 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 PEA15Q15121 130 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 MPV17L2Q567V2 206 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 KRTAP26-1Q6PEX3 210 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 RMI2Q96E14 147 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
HDGFL3-205ENST00000568129 IGHV1-24A0A0C4DH33 117 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 A0A1B0GUT8 65 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 HIGD1CA8MV81 97 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 MGPP08493 103 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 GCSHP23434 173 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 Q8N1X5 172 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 RNF185Q96GF1 192 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 TMEM191AQ9H0A3 160 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 NAT8Q9UHE5 227 aa5.39□□□□□ -1.55
HDGFL3-205ENST00000568129 SMIM27A0A1W2PRY6 76 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 TMEM262E9PQX1 116 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 NCR2O95944 276 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 FUSP35637 526 aaKnown RBP eCLIP5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 CEBPGP53567 150 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 RBX1P62877 108 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 MIAQ16674 131 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 KCNIP4Q6PIL6 250 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 Q6ZSA8 131 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 C15orf54Q8N8G6 183 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 Q8N976 141 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
HDGFL3-205ENST00000568129 NUP35Q8NFH5 326 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms