RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SMIM17P0DL12 118 aa8.42□□□□□ -1.06
RNF40-211ENST00000567365 BTF3P20290 206 aaKnown RBP8.42□□□□□ -1.06
RNF40-211ENST00000567365 RPL36AP83881 106 aaKnown RBP8.42□□□□□ -1.06
RNF40-211ENST00000567365 TWIST1Q15672 202 aa8.42□□□□□ -1.06
RNF40-211ENST00000567365 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
RNF40-211ENST00000567365 RPL36ALQ969Q0 106 aaKnown RBP8.42□□□□□ -1.06
RNF40-211ENST00000567365 A0A1B0GUT8 65 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 LINC00862A6NCI5 91 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 K7EP13 123 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
RNF40-211ENST00000567365 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
RNF40-211ENST00000567365 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 F5H697 171 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 MGPP08493 103 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 PNRC1Q12796 327 aaPredicted RBP8.4□□□□□ -1.06
RNF40-211ENST00000567365 LINC00336Q6ZUF6 198 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 DNAJC30Q96LL9 226 aa8.4□□□□□ -1.06
RNF40-211ENST00000567365 A0A087WWC5 75 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 TMEM218A2RU14 115 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 NTM-AS1Q6ZSK4 140 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 GATD1Q8NB37 220 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 TMEM191AQ9H0A3 160 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
RNF40-211ENST00000567365 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 H7C1H1 209 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 Q8N3U1 123 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 FRZBQ92765 325 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 NIT2Q9NQR4 276 aa8.38□□□□□ -1.07
RNF40-211ENST00000567365 TRBV6-8A0A0A6YYG3 113 aa8.37□□□□□ -1.07
RNF40-211ENST00000567365 DAZ4Q86SG3 579 aaKnown RBP8.37□□□□□ -1.07
RNF40-211ENST00000567365 COMMD7Q86VX2 200 aa8.37□□□□□ -1.07
RNF40-211ENST00000567365 DAZ3Q9NR90 486 aaKnown RBP8.37□□□□□ -1.07
RNF40-211ENST00000567365 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
RNF40-211ENST00000567365 PCLOQ9Y6V0 5065 aa8.37□□□□□ -1.07
RNF40-211ENST00000567365 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 TRAV26-2A0A0B4J265 109 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 GAS8-AS1O95177 125 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 RIGQ13278 110 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 C10orf91Q5T1B1 145 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 SMIM15Q7Z3B0 74 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 NIT1Q86X76 327 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 SEC11CQ9BY50 192 aa8.36□□□□□ -1.07
RNF40-211ENST00000567365 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 PPP1R2P9O14990 202 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 RAB4AP20338 218 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 TNP2Q05952 138 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 ANAPC16Q96DE5 110 aa8.35□□□□□ -1.07
RNF40-211ENST00000567365 RPL39LQ96EH5 51 aaKnown RBP8.35□□□□□ -1.07
RNF40-211ENST00000567365 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
RNF40-211ENST00000567365 IQCJQ1A5X6 159 aa8.34□□□□□ -1.07
RNF40-211ENST00000567365 TMEM97Q5BJF2 176 aa8.34□□□□□ -1.07
RNF40-211ENST00000567365 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
RNF40-211ENST00000567365 A0A1B0GW15 77 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 F8W036 122 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 MT-ND4LP03901 98 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
RNF40-211ENST00000567365 LAGE3Q14657 143 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 FAM104BQ5XKR9 115 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 CARHSP1Q9Y2V2 147 aaKnown RBP8.33□□□□□ -1.08
RNF40-211ENST00000567365 DNAH8Q96JB1 4490 aa8.33□□□□□ -1.08
RNF40-211ENST00000567365 KIAA1109Q2LD37 5005 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 NRACQ8N912 160 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 MRAP2Q96G30 205 aa8.32□□□□□ -1.08
RNF40-211ENST00000567365 CAMPP49913 170 aa8.31□□□□□ -1.08
RNF40-211ENST00000567365 POLR2KP53803 58 aaKnown RBP8.31□□□□□ -1.08
RNF40-211ENST00000567365 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
RNF40-211ENST00000567365 NFE4Q86UQ8 179 aa8.31□□□□□ -1.08
RNF40-211ENST00000567365 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
RNF40-211ENST00000567365 HBBP68871 147 aa8.3□□□□□ -1.08
RNF40-211ENST00000567365 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
RNF40-211ENST00000567365 MRPL54Q6P161 138 aaKnown RBP8.3□□□□□ -1.08
RNF40-211ENST00000567365 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
RNF40-211ENST00000567365 IMMP2LQ96T52 175 aa8.3□□□□□ -1.08
RNF40-211ENST00000567365 TMEM70Q9BUB7 260 aa8.3□□□□□ -1.08
RNF40-211ENST00000567365 HSPG2P98160 4391 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 TRBV25-1A0A075B6N4 114 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 IGHV1-24A0A0C4DH33 117 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 ATRAIDQ6UW56 229 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
RNF40-211ENST00000567365 TRBV24-1A0A075B6N3 115 aa8.28□□□□□ -1.08
RNF40-211ENST00000567365 TRBV27A0A0K0K1C4 114 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms