RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 TRAV9-1A0A075B6T8 112 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GAGE12JA6NER3 117 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 HBBP68871 147 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GAGE1Q13065 139 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GAGE4Q13068 117 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GAGE5Q13069 117 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GAGE13Q4V321 117 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 RASL11AQ6T310 242 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 GTSF1LQ9H1H1 148 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 VPS13DQ5THJ4 4388 aa14.01□□□□□ -0.17
RNF40-210ENST00000566811 M0QY20 66 aa14□□□□□ -0.17
RNF40-210ENST00000566811 CLRN3Q8NCR9 226 aa14□□□□□ -0.17
RNF40-210ENST00000566811 BTF3L4Q96K17 158 aa14□□□□□ -0.17
RNF40-210ENST00000566811 SNAPINO95295 136 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 UBE2D3P61077 147 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 UBE2D2P62837 147 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 TMEM97Q5BJF2 176 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 NEXN-AS1Q8NBZ9 246 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 ZNRF2Q8NHG8 242 aa13.99□□□□□ -0.17
RNF40-210ENST00000566811 A0A1B0GXF2 115 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 S100PP25815 95 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 DAZ4Q86SG3 579 aaKnown RBP13.98□□□□□ -0.17
RNF40-210ENST00000566811 GATD1Q8NB37 220 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 NIT2Q9NQR4 276 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 DAZ3Q9NR90 486 aaKnown RBP13.98□□□□□ -0.17
RNF40-210ENST00000566811 TNFRSF18Q9Y5U5 241 aa13.98□□□□□ -0.17
RNF40-210ENST00000566811 C7orf77A4D0Y5 90 aa13.97□□□□□ -0.17
RNF40-210ENST00000566811 K7EP13 123 aa13.97□□□□□ -0.17
RNF40-210ENST00000566811 PPP1R17O96001 155 aa13.97□□□□□ -0.17
RNF40-210ENST00000566811 APOC3P02656 99 aa13.97□□□□□ -0.17
RNF40-210ENST00000566811 LELP1Q5T871 98 aa13.97□□□□□ -0.17
RNF40-210ENST00000566811 TTC32Q5I0X7 151 aa13.96□□□□□ -0.17
RNF40-210ENST00000566811 MRPL54Q6P161 138 aaKnown RBP13.96□□□□□ -0.17
RNF40-210ENST00000566811 DNAH6Q9C0G6 4158 aa13.95□□□□□ -0.18
RNF40-210ENST00000566811 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
RNF40-210ENST00000566811 CAMPP49913 170 aa13.95□□□□□ -0.18
RNF40-210ENST00000566811 KMT2AQ03164 3969 aa13.94□□□□□ -0.18
RNF40-210ENST00000566811 SIVA1O15304 175 aa13.94□□□□□ -0.18
RNF40-210ENST00000566811 Q9H8V8 135 aa13.94□□□□□ -0.18
RNF40-210ENST00000566811 Q9UF83 564 aa13.94□□□□□ -0.18
RNF40-210ENST00000566811 RAB4AP20338 218 aa13.93□□□□□ -0.18
RNF40-210ENST00000566811 FAM104BQ5XKR9 115 aa13.93□□□□□ -0.18
RNF40-210ENST00000566811 AMN1Q8IY45 258 aa13.93□□□□□ -0.18
RNF40-210ENST00000566811 RPS10P5Q9NQ39 176 aa13.93□□□□□ -0.18
RNF40-210ENST00000566811 OR10J3Q5JRS4 329 aa13.92□□□□□ -0.18
RNF40-210ENST00000566811 RNF185Q96GF1 192 aa13.92□□□□□ -0.18
RNF40-210ENST00000566811 TRAV26-2A0A0B4J265 109 aa13.91□□□□□ -0.18
RNF40-210ENST00000566811 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
RNF40-210ENST00000566811 PPBPP02775 128 aa13.91□□□□□ -0.18
RNF40-210ENST00000566811 BTF3P20290 206 aaKnown RBP13.91□□□□□ -0.18
RNF40-210ENST00000566811 TRAV9-2A0A087WT02 112 aa13.9□□□□□ -0.18
RNF40-210ENST00000566811 PKIAP61925 76 aa13.9□□□□□ -0.18
RNF40-210ENST00000566811 COX19Q49B96 90 aa13.9□□□□□ -0.18
RNF40-210ENST00000566811 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
RNF40-210ENST00000566811 NBDYA0A0U1RRE5 68 aa13.89□□□□□ -0.19
RNF40-210ENST00000566811 DNAH10OSP0CZ25 163 aa13.89□□□□□ -0.19
RNF40-210ENST00000566811 C10orf126Q8N4M7 172 aa13.89□□□□□ -0.19
RNF40-210ENST00000566811 FRAS1Q86XX4 4008 aa13.88□□□□□ -0.19
RNF40-210ENST00000566811 TRBV6-8A0A0A6YYG3 113 aa13.88□□□□□ -0.19
RNF40-210ENST00000566811 MRPL51Q4U2R6 128 aaKnown RBP13.88□□□□□ -0.19
RNF40-210ENST00000566811 LINC01556Q5JQF7 62 aa13.88□□□□□ -0.19
RNF40-210ENST00000566811 SLC7A5P1Q8MH63 180 aa13.88□□□□□ -0.19
RNF40-210ENST00000566811 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
RNF40-210ENST00000566811 TRBV25-1A0A075B6N4 114 aa13.87□□□□□ -0.19
RNF40-210ENST00000566811 NCR2O95944 276 aa13.87□□□□□ -0.19
RNF40-210ENST00000566811 Q6ZR54 194 aa13.87□□□□□ -0.19
RNF40-210ENST00000566811 ST20Q9HBF5 79 aa13.87□□□□□ -0.19
RNF40-210ENST00000566811 IGLV2-18A0A075B6J9 118 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 PHOX2AO14813 284 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 CKS2P33552 79 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 COTL1Q14019 142 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 WFDC10BQ8IUB3 73 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 RPL39LQ96EH5 51 aaKnown RBP13.86□□□□□ -0.19
RNF40-210ENST00000566811 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
RNF40-210ENST00000566811 SDHAF1A6NFY7 115 aa13.85□□□□□ -0.19
RNF40-210ENST00000566811 IQCJQ1A5X6 159 aa13.85□□□□□ -0.19
RNF40-210ENST00000566811 ORMDL3Q8N138 153 aa13.85□□□□□ -0.19
RNF40-210ENST00000566811 URGCP-MRPS24S4R325 110 aa13.85□□□□□ -0.19
RNF40-210ENST00000566811 HERC2O95714 4834 aa13.85□□□□□ -0.19
RNF40-210ENST00000566811 TRBV24-1A0A075B6N3 115 aa13.84□□□□□ -0.19
RNF40-210ENST00000566811 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
RNF40-210ENST00000566811 HLA-DQA1P01909 254 aa13.84□□□□□ -0.19
RNF40-210ENST00000566811 MT-ND6P03923 174 aa13.84□□□□□ -0.19
RNF40-210ENST00000566811 C20orf78Q9BR46 151 aa13.84□□□□□ -0.19
RNF40-210ENST00000566811 I3L3M4 83 aa13.83□□□□□ -0.2
RNF40-210ENST00000566811 RPL32P62910 135 aaKnown RBP13.83□□□□□ -0.2
RNF40-210ENST00000566811 NRACQ8N912 160 aa13.83□□□□□ -0.2
RNF40-210ENST00000566811 TMEM70Q9BUB7 260 aa13.83□□□□□ -0.2
RNF40-210ENST00000566811 GNB1LQ9BYB4 327 aa13.83□□□□□ -0.2
RNF40-210ENST00000566811 TRBV27A0A0K0K1C4 114 aa13.82□□□□□ -0.2
RNF40-210ENST00000566811 TCAPO15273 167 aa13.82□□□□□ -0.2
RNF40-210ENST00000566811 SUMO2P61956 95 aaKnown RBP13.82□□□□□ -0.2
RNF40-210ENST00000566811 D6R8Y8 96 aa13.81□□□□□ -0.2
RNF40-210ENST00000566811 RPS10P46783 165 aaKnown RBP13.81□□□□□ -0.2
RNF40-210ENST00000566811 LAGE3Q14657 143 aa13.81□□□□□ -0.2
RNF40-210ENST00000566811 TMEM136Q6ZRR5 245 aa13.81□□□□□ -0.2
RNF40-210ENST00000566811 NIT1Q86X76 327 aa13.81□□□□□ -0.2
RNF40-210ENST00000566811 A0A087WX48 190 aa13.8□□□□□ -0.2
RNF40-210ENST00000566811 VCYO14598 125 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms