RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
CLN6-207ENST00000566347 DERL1Q9BUN8 251 aa13.29□□□□□ -0.28
CLN6-207ENST00000566347 RBFOX3A6NFN3 312 aa13.28□□□□□ -0.28
CLN6-207ENST00000566347 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
CLN6-207ENST00000566347 CENPWQ5EE01 88 aa13.27□□□□□ -0.29
CLN6-207ENST00000566347 DAZAP1Q96EP5 407 aaKnown RBP13.27□□□□□ -0.29
CLN6-207ENST00000566347 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
CLN6-207ENST00000566347 CRPP02741 224 aa13.26□□□□□ -0.29
CLN6-207ENST00000566347 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
CLN6-207ENST00000566347 SSTP61278 116 aa13.26□□□□□ -0.29
CLN6-207ENST00000566347 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
CLN6-207ENST00000566347 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
CLN6-207ENST00000566347 SULT1A2P50226 295 aa13.25□□□□□ -0.29
CLN6-207ENST00000566347 CHCHD5Q9BSY4 110 aa13.25□□□□□ -0.29
CLN6-207ENST00000566347 VAX2Q9UIW0 290 aa13.25□□□□□ -0.29
CLN6-207ENST00000566347 FLG2Q5D862 2391 aaPredicted RBP13.24□□□□□ -0.29
CLN6-207ENST00000566347 PDE6DO43924 150 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 IFNA1P01562 189 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 GNG4P50150 75 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
CLN6-207ENST00000566347 C14orf177Q52M58 125 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 FER1L6-AS1Q8NA97 138 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 HERC1Q15751 4861 aa13.24□□□□□ -0.29
CLN6-207ENST00000566347 IGLV2-8P01709 118 aa13.23□□□□□ -0.29
CLN6-207ENST00000566347 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
CLN6-207ENST00000566347 IGLC6P0CF74 106 aa13.23□□□□□ -0.29
CLN6-207ENST00000566347 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
CLN6-207ENST00000566347 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
CLN6-207ENST00000566347 TPPP3Q9BW30 176 aa13.23□□□□□ -0.29
CLN6-207ENST00000566347 MYCBP2O75592 4640 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 XKRY2A2RUG3 117 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 H7C1H1 209 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 GZMBP10144 247 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 CACNG7P62955 275 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 BIN3Q9NQY0 253 aa13.22□□□□□ -0.29
CLN6-207ENST00000566347 RAB19A4D1S5 217 aa13.21□□□□□ -0.29
CLN6-207ENST00000566347 PLA2G1BP04054 148 aaKnown RBP13.21□□□□□ -0.29
CLN6-207ENST00000566347 MIAQ16674 131 aa13.21□□□□□ -0.29
CLN6-207ENST00000566347 TRBV25-1A0A075B6N4 114 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 F2Z2F3 143 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 P01737 135 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 MGPP08493 103 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 LINC01620Q4KN68 170 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 NTM-AS1Q6ZSK4 140 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 MED9Q9NWA0 146 aa13.2□□□□□ -0.3
CLN6-207ENST00000566347 M0QY20 66 aa13.19□□□□□ -0.3
CLN6-207ENST00000566347 BCL2P10415 239 aa13.19□□□□□ -0.3
CLN6-207ENST00000566347 LINC00528Q8N1L1 170 aa13.19□□□□□ -0.3
CLN6-207ENST00000566347 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
CLN6-207ENST00000566347 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 TRGC1P0CF51 173 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 RBX1P62877 108 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 IQCJQ1A5X6 159 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 SUMO4Q6EEV6 95 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 SCXQ7RTU7 201 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 PRR34Q9NV39 138 aa13.17□□□□□ -0.3
CLN6-207ENST00000566347 IGHV1-24A0A0C4DH33 117 aa13.16□□□□□ -0.3
CLN6-207ENST00000566347 GAGE6Q13070 117 aa13.16□□□□□ -0.3
CLN6-207ENST00000566347 CHAC1Q9BUX1 264 aa13.16□□□□□ -0.3
CLN6-207ENST00000566347 HLA-DQA1P01909 254 aa13.15□□□□□ -0.3
CLN6-207ENST00000566347 LYZL1Q6UWQ5 148 aa13.15□□□□□ -0.3
CLN6-207ENST00000566347 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 WDR73Q6P4I2 378 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 RASL11AQ6T310 242 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 LINC00269Q8N2A0 174 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
CLN6-207ENST00000566347 NTF3P20783 257 aa13.13□□□□□ -0.31
CLN6-207ENST00000566347 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
CLN6-207ENST00000566347 CTRLP40313 264 aa13.12□□□□□ -0.31
CLN6-207ENST00000566347 CLPSL2Q6UWE3 100 aa13.12□□□□□ -0.31
CLN6-207ENST00000566347 NUDT10Q8NFP7 164 aa13.12□□□□□ -0.31
CLN6-207ENST00000566347 NUDT11Q96G61 164 aa13.12□□□□□ -0.31
CLN6-207ENST00000566347 CIRBP-AS1Q8TBR5 109 aa13.11□□□□□ -0.31
CLN6-207ENST00000566347 PGLYRP4Q96LB8 373 aa13.11□□□□□ -0.31
CLN6-207ENST00000566347 TMEM243Q9BU79 118 aa13.11□□□□□ -0.31
CLN6-207ENST00000566347 NIT2Q9NQR4 276 aa13.11□□□□□ -0.31
CLN6-207ENST00000566347 DGAT2L7PQ6IED9 249 aa13.1□□□□□ -0.31
CLN6-207ENST00000566347 DEFB104AQ8WTQ1 72 aa13.1□□□□□ -0.31
CLN6-207ENST00000566347 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
CLN6-207ENST00000566347 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
CLN6-207ENST00000566347 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
CLN6-207ENST00000566347 PRSS1P07477 247 aa13.09□□□□□ -0.31
CLN6-207ENST00000566347 REG3AQ06141 175 aa13.09□□□□□ -0.31
CLN6-207ENST00000566347 TWIST1Q15672 202 aa13.09□□□□□ -0.31
CLN6-207ENST00000566347 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
CLN6-207ENST00000566347 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
CLN6-207ENST00000566347 J3QL48 77 aa13.08□□□□□ -0.32
CLN6-207ENST00000566347 Q6ZNX1 250 aa13.08□□□□□ -0.32
CLN6-207ENST00000566347 C20orf203Q8NBC4 194 aa13.07□□□□□ -0.32
CLN6-207ENST00000566347 CLRN3Q8NCR9 226 aa13.07□□□□□ -0.32
CLN6-207ENST00000566347 OCC1Q8TAD7 63 aa13.07□□□□□ -0.32
CLN6-207ENST00000566347 RNASE7Q9H1E1 156 aaKnown RBP13.07□□□□□ -0.32
CLN6-207ENST00000566347 K7EN84 100 aa13.06□□□□□ -0.32
CLN6-207ENST00000566347 UBE2L6O14933 153 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms