RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MPV17L2Q567V2 206 aa11.99□□□□□ -0.49
USB1-213ENST00000566292 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
USB1-213ENST00000566292 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
USB1-213ENST00000566292 F5H697 171 aa11.98□□□□□ -0.49
USB1-213ENST00000566292 Q0VG73 95 aa11.98□□□□□ -0.49
USB1-213ENST00000566292 NTM-AS1Q6ZSK4 140 aa11.98□□□□□ -0.49
USB1-213ENST00000566292 C15orf54Q8N8G6 183 aa11.98□□□□□ -0.49
USB1-213ENST00000566292 IGLV2-8P01709 118 aa11.97□□□□□ -0.49
USB1-213ENST00000566292 GZMBP10144 247 aa11.97□□□□□ -0.49
USB1-213ENST00000566292 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
USB1-213ENST00000566292 LINC00528Q8N1L1 170 aa11.97□□□□□ -0.49
USB1-213ENST00000566292 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
USB1-213ENST00000566292 IGLC6P0CF74 106 aa11.96□□□□□ -0.49
USB1-213ENST00000566292 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
USB1-213ENST00000566292 AP1S3Q96PC3 154 aa11.96□□□□□ -0.49
USB1-213ENST00000566292 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
USB1-213ENST00000566292 C1orf43Q9BWL3 253 aa11.96□□□□□ -0.49
USB1-213ENST00000566292 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
USB1-213ENST00000566292 SMIM17P0DL12 118 aa11.95□□□□□ -0.5
USB1-213ENST00000566292 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
USB1-213ENST00000566292 C19orf71A6NCJ1 209 aa11.94□□□□□ -0.5
USB1-213ENST00000566292 CRPP02741 224 aa11.94□□□□□ -0.5
USB1-213ENST00000566292 RAB5CP51148 216 aa11.94□□□□□ -0.5
USB1-213ENST00000566292 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.94□□□□□ -0.5
USB1-213ENST00000566292 TPPP3Q9BW30 176 aa11.94□□□□□ -0.5
USB1-213ENST00000566292 PLA2G1BP04054 148 aaKnown RBP11.93□□□□□ -0.5
USB1-213ENST00000566292 SULT1A2P50226 295 aa11.93□□□□□ -0.5
USB1-213ENST00000566292 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
USB1-213ENST00000566292 FER1L6-AS1Q8NA97 138 aa11.93□□□□□ -0.5
USB1-213ENST00000566292 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
USB1-213ENST00000566292 M0QY20 66 aa11.92□□□□□ -0.5
USB1-213ENST00000566292 RPS20P60866 119 aaKnown RBP11.92□□□□□ -0.5
USB1-213ENST00000566292 PKIAP61925 76 aa11.92□□□□□ -0.5
USB1-213ENST00000566292 DAZAP1Q96EP5 407 aaKnown RBP11.92□□□□□ -0.5
USB1-213ENST00000566292 CHAC1Q9BUX1 264 aa11.92□□□□□ -0.5
USB1-213ENST00000566292 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 MGPP08493 103 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 GNG4P50150 75 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 RBX1P62877 108 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
USB1-213ENST00000566292 GAGE6Q13070 117 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 C14orf177Q52M58 125 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 EIF5AL1Q6IS14 154 aaKnown RBP11.91□□□□□ -0.5
USB1-213ENST00000566292 SMIM12Q96EX1 92 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
USB1-213ENST00000566292 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 TEX46H3BTG2 121 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 MIAQ16674 131 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 SUMO4Q6EEV6 95 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
USB1-213ENST00000566292 USP17L23D6RBM5 183 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 PDE6DO43924 150 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 CACNG7P62955 275 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 CIRBP-AS1Q8TBR5 109 aa11.89□□□□□ -0.51
USB1-213ENST00000566292 P01737 135 aa11.88□□□□□ -0.51
USB1-213ENST00000566292 BCL2P10415 239 aa11.88□□□□□ -0.51
USB1-213ENST00000566292 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
USB1-213ENST00000566292 TCTE3Q8IZS6 198 aa11.88□□□□□ -0.51
USB1-213ENST00000566292 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
USB1-213ENST00000566292 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
USB1-213ENST00000566292 IGHV1-24A0A0C4DH33 117 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 F2Z2F3 143 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 H7C1H1 209 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 IFNA1P01562 189 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 PRSS1P07477 247 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
USB1-213ENST00000566292 XKRY2A2RUG3 117 aa11.86□□□□□ -0.51
USB1-213ENST00000566292 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
USB1-213ENST00000566292 J3QL48 77 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 NTF3P20783 257 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 SLC51BQ86UW2 128 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 NUDT10Q8NFP7 164 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
USB1-213ENST00000566292 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
USB1-213ENST00000566292 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
USB1-213ENST00000566292 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
USB1-213ENST00000566292 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
USB1-213ENST00000566292 BIN3Q9NQY0 253 aa11.84□□□□□ -0.51
USB1-213ENST00000566292 KRTAP29-1A8MX34 341 aaPredicted RBP11.83□□□□□ -0.52
USB1-213ENST00000566292 CTRLP40313 264 aa11.83□□□□□ -0.52
USB1-213ENST00000566292 REG3AQ06141 175 aa11.83□□□□□ -0.52
USB1-213ENST00000566292 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
USB1-213ENST00000566292 PKHD1L1Q86WI1 4243 aa11.83□□□□□ -0.52
USB1-213ENST00000566292 LRP1Q07954 4544 aaKnown RBP11.82□□□□□ -0.52
USB1-213ENST00000566292 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 K7EN84 100 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
USB1-213ENST00000566292 A0A1B0GUV1 79 aa11.81□□□□□ -0.52
USB1-213ENST00000566292 C9orf163Q8N9P6 203 aa11.81□□□□□ -0.52
USB1-213ENST00000566292 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
USB1-213ENST00000566292 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms