RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 OR2D3Q8NGH3 330 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 OR10G8Q8NGN5 311 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 DERL1Q9BUN8 251 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 MANBALQ9NQG1 85 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 MED9Q9NWA0 146 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 MUC4Q99102 2169 aa4.21□□□□□ -1.73
TCF4-228ENST00000565393 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 XKRY2A2RUG3 117 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 SNAI2O43623 268 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 CXCL1P09341 107 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 GNG4P50150 75 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 PKIAP61925 76 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 ATRAIDQ6UW56 229 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 LINC00469Q8N7U9 141 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 FER1L6-AS1Q8NA97 138 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 DPH3Q96FX2 82 aa4.21□□□□□ -1.74
TCF4-228ENST00000565393 TRBV25-1A0A075B6N4 114 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 TRAV1-1A0A0B4J248 108 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 F2Z2F3 143 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 H7C1H1 209 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 PDE6DO43924 150 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 IFNA1P01562 189 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 P01737 135 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 HLA-DQA1P01909 254 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 RBX1P62877 108 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 CACNG7P62955 275 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 MPV17L2Q567V2 206 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 CENPWQ5EE01 88 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 NTM-AS1Q6ZSK4 140 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 LINC00528Q8N1L1 170 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 LINC00269Q8N2A0 174 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 DEFB104AQ8WTQ1 72 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 AP1S3Q96PC3 154 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 BIN3Q9NQY0 253 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 KIF25-AS1Q9Y6Z4 181 aa4.2□□□□□ -1.74
TCF4-228ENST00000565393 IGHV1-24A0A0C4DH33 117 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 M0QY20 66 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 NTF3P20783 257 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 SULT1A2P50226 295 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 NKX2-5P52952 324 aaPredicted RBP4.19□□□□□ -1.74
TCF4-228ENST00000565393 TWIST1Q15672 202 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 MIAQ16674 131 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 LYZL1Q6UWQ5 148 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 SCXQ7RTU7 201 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 SLC51BQ86UW2 128 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 C11orf52Q96A22 123 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 VAX2Q9UIW0 290 aa4.19□□□□□ -1.74
TCF4-228ENST00000565393 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 PKD1P98161 4303 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 IGLV10-54A0A075B6I4 117 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 C19orf71A6NCJ1 209 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 USP17L23D6RBM5 183 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 IGLV2-8P01709 118 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 TRGC1P0CF51 173 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 IGLC6P0CF74 106 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
TCF4-228ENST00000565393 REG3AQ06141 175 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 SUMO4Q6EEV6 95 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 DGAT2L7PQ6IED9 249 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 RASL11AQ6T310 242 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 Q6ZSA8 131 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 C9orf62Q8N4C0 152 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 NUDT10Q8NFP7 164 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 CIRBP-AS1Q8TBR5 109 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 NUDT11Q96G61 164 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 NIT2Q9NQR4 276 aa4.18□□□□□ -1.74
TCF4-228ENST00000565393 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 UBE2L6O14933 153 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 S100A6P06703 90 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 PRSS1P07477 247 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 BCL2P10415 239 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 TAGLN2P37802 199 aaKnown RBP4.17□□□□□ -1.74
TCF4-228ENST00000565393 IQCJQ1A5X6 159 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 WDR73Q6P4I2 378 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 SMIM15Q7Z3B0 74 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 OCC1Q8TAD7 63 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 DPH3P1Q9H4G8 78 aa4.17□□□□□ -1.74
TCF4-228ENST00000565393 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 IGKV3OR2-268A0A0C4DH90 116 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 hDV102S1A0JD36 115 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 AMTP48728 403 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 CEBPGP53567 150 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 COTL1Q14019 142 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 TCTE3Q8IZS6 198 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 CLRN3Q8NCR9 226 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 RNASE7Q9H1E1 156 aaKnown RBP4.16□□□□□ -1.74
TCF4-228ENST00000565393 AP5S1Q9NUS5 200 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 DNAH6Q9C0G6 4158 aa4.16□□□□□ -1.74
TCF4-228ENST00000565393 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.74
TCF4-228ENST00000565393 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 TRBV20OR9-2A0A075B6H5 130 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms