RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
HERC2-207ENST00000564734 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
HERC2-207ENST00000564734 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
HERC2-207ENST00000564734 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
HERC2-207ENST00000564734 FAM74A4Q5TZK3 123 aa11.25□□□□□ -0.61
HERC2-207ENST00000564734 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
HERC2-207ENST00000564734 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
HERC2-207ENST00000564734 ZNF815PA8K554 130 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
HERC2-207ENST00000564734 ZNF876PQ49A33 203 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 WFDC11Q8NEX6 87 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
HERC2-207ENST00000564734 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
HERC2-207ENST00000564734 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
HERC2-207ENST00000564734 TEP1Q99973 2627 aaKnown RBP11.23□□□□□ -0.61
HERC2-207ENST00000564734 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
HERC2-207ENST00000564734 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 P0DMU3 169 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 EMP1P54849 157 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 RHOHQ15669 191 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 ZNF56Q15929 161 aa11.23□□□□□ -0.61
HERC2-207ENST00000564734 A8MTW9 85 aa11.22□□□□□ -0.61
HERC2-207ENST00000564734 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
HERC2-207ENST00000564734 MAST4O15021 2626 aa11.22□□□□□ -0.61
HERC2-207ENST00000564734 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
HERC2-207ENST00000564734 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
HERC2-207ENST00000564734 PDZD2O15018 2839 aa11.21□□□□□ -0.61
HERC2-207ENST00000564734 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
HERC2-207ENST00000564734 C18orf65Q6ZTR6 163 aa11.21□□□□□ -0.61
HERC2-207ENST00000564734 AGRNO00468 2067 aa11.21□□□□□ -0.61
HERC2-207ENST00000564734 HERVK_113P61574 105 aa11.21□□□□□ -0.62
HERC2-207ENST00000564734 Q8N2B8 174 aa11.21□□□□□ -0.62
HERC2-207ENST00000564734 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
HERC2-207ENST00000564734 A0A0J9YY99 117 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 UBE2D1P51668 147 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 AMELXQ99217 191 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 F8P00451 2351 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 HIVEP2P31629 2446 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 SLURP1P55000 103 aa11.2□□□□□ -0.62
HERC2-207ENST00000564734 F8W1H4 67 aa11.19□□□□□ -0.62
HERC2-207ENST00000564734 SCGB2A2Q13296 93 aa11.19□□□□□ -0.62
HERC2-207ENST00000564734 SCGB1D4Q6XE38 83 aa11.19□□□□□ -0.62
HERC2-207ENST00000564734 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
HERC2-207ENST00000564734 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
HERC2-207ENST00000564734 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
HERC2-207ENST00000564734 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
HERC2-207ENST00000564734 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
HERC2-207ENST00000564734 I3L3M4 83 aa11.18□□□□□ -0.62
HERC2-207ENST00000564734 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
HERC2-207ENST00000564734 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
HERC2-207ENST00000564734 H3BMM0 161 aa11.18□□□□□ -0.62
HERC2-207ENST00000564734 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
HERC2-207ENST00000564734 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 H3BMG7 143 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 DEFB131AP59861 70 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 WFDC2Q14508 124 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
HERC2-207ENST00000564734 TMEM238LA0A1B0GVL6 79 aa11.16□□□□□ -0.62
HERC2-207ENST00000564734 A6NJY4 79 aa11.16□□□□□ -0.62
HERC2-207ENST00000564734 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
HERC2-207ENST00000564734 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
HERC2-207ENST00000564734 SLC25A29Q8N8R3 303 aa11.16□□□□□ -0.62
HERC2-207ENST00000564734 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
HERC2-207ENST00000564734 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
HERC2-207ENST00000564734 PGPEP1Q9NXJ5 209 aa11.15□□□□□ -0.62
HERC2-207ENST00000564734 CR1P17927 2039 aa11.15□□□□□ -0.62
HERC2-207ENST00000564734 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.63
HERC2-207ENST00000564734 J3QQQ9 107 aa11.15□□□□□ -0.63
HERC2-207ENST00000564734 IGHV3-30P01768 117 aa11.15□□□□□ -0.63
HERC2-207ENST00000564734 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.63
HERC2-207ENST00000564734 RPL24P83731 157 aaKnown RBP11.15□□□□□ -0.63
HERC2-207ENST00000564734 PROK1P58294 105 aa11.14□□□□□ -0.63
HERC2-207ENST00000564734 PTH2Q96A98 100 aa11.14□□□□□ -0.63
HERC2-207ENST00000564734 LEPROTO15243 131 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
HERC2-207ENST00000564734 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 ZNF469Q96JG9 3925 aaPredicted RBP11.13□□□□□ -0.63
HERC2-207ENST00000564734 TSPAN13O95857 204 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 PRM2P04554 102 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 PIK3CD-AS1Q5SR53 167 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 LRRC75A-AS1Q8N1F1 130 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
HERC2-207ENST00000564734 OTOGQ6ZRI0 2925 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 NDUFA11Q86Y39 141 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
HERC2-207ENST00000564734 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms