RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 HAMPP81172 84 aa9.86□□□□□ -0.83
SPG7-210ENST00000564409 C1orf43Q9BWL3 253 aa9.86□□□□□ -0.83
SPG7-210ENST00000564409 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
SPG7-210ENST00000564409 CRPP02741 224 aa9.85□□□□□ -0.83
SPG7-210ENST00000564409 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
SPG7-210ENST00000564409 GNG13Q9P2W3 67 aa9.85□□□□□ -0.83
SPG7-210ENST00000564409 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
SPG7-210ENST00000564409 XKRY2A2RUG3 117 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 H7C1H1 209 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 MIAQ16674 131 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 BIN3Q9NQY0 253 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
SPG7-210ENST00000564409 HERC1Q15751 4861 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 F2Z2F3 143 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 PDE6DO43924 150 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
SPG7-210ENST00000564409 CACNG7P62955 275 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 FAT1Q14517 4588 aa9.83□□□□□ -0.84
SPG7-210ENST00000564409 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 MUC21A0A0G2JKD1 596 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 MUC21A0A140T8X8 626 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 IFNA1P01562 189 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 CCL20P78556 96 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 FER1L6-AS1Q8NA97 138 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
SPG7-210ENST00000564409 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
SPG7-210ENST00000564409 GNG4P50150 75 aa9.81□□□□□ -0.84
SPG7-210ENST00000564409 SULT1A2P50226 295 aa9.81□□□□□ -0.84
SPG7-210ENST00000564409 MEF2BQ02080 365 aaPredicted RBP9.81□□□□□ -0.84
SPG7-210ENST00000564409 OR2D3Q8NGH3 330 aa9.81□□□□□ -0.84
SPG7-210ENST00000564409 CHAC1Q9BUX1 264 aa9.81□□□□□ -0.84
SPG7-210ENST00000564409 C19orf71A6NCJ1 209 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 M0QY20 66 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 IGLV2-8P01709 118 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 IQCJQ1A5X6 159 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 NTM-AS1Q6ZSK4 140 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
SPG7-210ENST00000564409 P01737 135 aa9.79□□□□□ -0.84
SPG7-210ENST00000564409 TRGC1P0CF51 173 aa9.79□□□□□ -0.84
SPG7-210ENST00000564409 SSTP61278 116 aa9.79□□□□□ -0.84
SPG7-210ENST00000564409 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
SPG7-210ENST00000564409 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SPG7-210ENST00000564409 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 RBX1P62877 108 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 SLC51BQ86UW2 128 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 TCTE3Q8IZS6 198 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 MED9Q9NWA0 146 aa9.78□□□□□ -0.84
SPG7-210ENST00000564409 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
SPG7-210ENST00000564409 MGPP08493 103 aa9.77□□□□□ -0.85
SPG7-210ENST00000564409 GZMBP10144 247 aa9.77□□□□□ -0.85
SPG7-210ENST00000564409 BCL2P10415 239 aa9.77□□□□□ -0.85
SPG7-210ENST00000564409 A0A1B0GUV1 79 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 J3QL48 77 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 PGLYRP4Q96LB8 373 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 DPH3P1Q9H4G8 78 aa9.76□□□□□ -0.85
SPG7-210ENST00000564409 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 GAGE6Q13070 117 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 LYZL1Q6UWQ5 148 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 CIRBP-AS1Q8TBR5 109 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 NIT2Q9NQR4 276 aa9.75□□□□□ -0.85
SPG7-210ENST00000564409 TRBV20OR9-2A0A075B6H5 130 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
SPG7-210ENST00000564409 NTF3P20783 257 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 CTRLP40313 264 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
SPG7-210ENST00000564409 PRSS1P07477 247 aa9.73□□□□□ -0.85
SPG7-210ENST00000564409 NKX2-5P52952 324 aaPredicted RBP9.73□□□□□ -0.85
SPG7-210ENST00000564409 REG3AQ06141 175 aa9.73□□□□□ -0.85
SPG7-210ENST00000564409 C9orf163Q8N9P6 203 aa9.73□□□□□ -0.85
SPG7-210ENST00000564409 DNAH8Q96JB1 4490 aa9.73□□□□□ -0.85
SPG7-210ENST00000564409 KRTAP26-1Q6PEX3 210 aa9.72□□□□□ -0.85
SPG7-210ENST00000564409 NUDT10Q8NFP7 164 aa9.72□□□□□ -0.85
SPG7-210ENST00000564409 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
SPG7-210ENST00000564409 RPP21Q9H633 154 aaKnown RBP9.71□□□□□ -0.86
SPG7-210ENST00000564409 UBE2L6O14933 153 aa9.7□□□□□ -0.86
SPG7-210ENST00000564409 COTL1Q14019 142 aa9.7□□□□□ -0.86
SPG7-210ENST00000564409 TWIST1Q15672 202 aa9.7□□□□□ -0.86
SPG7-210ENST00000564409 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
SPG7-210ENST00000564409 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms