RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 CIRBP-AS1Q8TBR5 109 aa15.54■□□□□ 0.08
NME3-206ENST00000564252 CRPP02741 224 aa15.53■□□□□ 0.08
NME3-206ENST00000564252 C14orf177Q52M58 125 aa15.53■□□□□ 0.08
NME3-206ENST00000564252 SPANXN1Q5VSR9 72 aa15.53■□□□□ 0.08
NME3-206ENST00000564252 CHCHD5Q9BSY4 110 aa15.52■□□□□ 0.08
NME3-206ENST00000564252 KIF25-AS1Q9Y6Z4 181 aa15.52■□□□□ 0.08
NME3-206ENST00000564252 HMSDA8MTL9 139 aa15.51■□□□□ 0.07
NME3-206ENST00000564252 ANGP03950 147 aaKnown RBP15.51■□□□□ 0.07
NME3-206ENST00000564252 NTM-AS1Q6ZSK4 140 aa15.51■□□□□ 0.07
NME3-206ENST00000564252 TMUB2Q71RG4 321 aa15.51■□□□□ 0.07
NME3-206ENST00000564252 VAX2Q9UIW0 290 aa15.51■□□□□ 0.07
NME3-206ENST00000564252 F5H697 171 aa15.5■□□□□ 0.07
NME3-206ENST00000564252 H2AFB1P0C5Y9 115 aa15.5■□□□□ 0.07
NME3-206ENST00000564252 SSTP61278 116 aa15.5■□□□□ 0.07
NME3-206ENST00000564252 PKIAP61925 76 aa15.5■□□□□ 0.07
NME3-206ENST00000564252 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.5■□□□□ 0.07
NME3-206ENST00000564252 A0A0D9SG52 128 aa15.49■□□□□ 0.07
NME3-206ENST00000564252 BCL2L11O43521 198 aa15.49■□□□□ 0.07
NME3-206ENST00000564252 RPL35P42766 123 aaKnown RBP15.49■□□□□ 0.07
NME3-206ENST00000564252 USP17L23D6RBM5 183 aa15.48■□□□□ 0.07
NME3-206ENST00000564252 MIAQ16674 131 aa15.48■□□□□ 0.07
NME3-206ENST00000564252 TMEM97Q5BJF2 176 aa15.48■□□□□ 0.07
NME3-206ENST00000564252 KANTRA0A1W2PQU2 76 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 IGLV2-8P01709 118 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 HLA-DQA1P01909 254 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 AP1S3Q96PC3 154 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 DERL1Q9BUN8 251 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 PRR34Q9NV39 138 aa15.47■□□□□ 0.07
NME3-206ENST00000564252 SMIM17P0DL12 118 aa15.46■□□□□ 0.07
NME3-206ENST00000564252 PRSS1P07477 247 aa15.45■□□□□ 0.06
NME3-206ENST00000564252 RBX1P62877 108 aa15.45■□□□□ 0.06
NME3-206ENST00000564252 C11orf52Q96A22 123 aa15.45■□□□□ 0.06
NME3-206ENST00000564252 CCL20P78556 96 aa15.44■□□□□ 0.06
NME3-206ENST00000564252 GAGE6Q13070 117 aa15.44■□□□□ 0.06
NME3-206ENST00000564252 KRTAP26-1Q6PEX3 210 aa15.44■□□□□ 0.06
NME3-206ENST00000564252 CLPSL2Q6UWE3 100 aa15.44■□□□□ 0.06
NME3-206ENST00000564252 MANBALQ9NQG1 85 aa15.44■□□□□ 0.06
NME3-206ENST00000564252 TRBV25-1A0A075B6N4 114 aa15.43■□□□□ 0.06
NME3-206ENST00000564252 IGLC6P0CF74 106 aa15.43■□□□□ 0.06
NME3-206ENST00000564252 GZMBP10144 247 aa15.43■□□□□ 0.06
NME3-206ENST00000564252 EIF5AP63241 154 aaKnown RBP15.43■□□□□ 0.06
NME3-206ENST00000564252 M0QY20 66 aa15.42■□□□□ 0.06
NME3-206ENST00000564252 IQCJQ1A5X6 159 aa15.42■□□□□ 0.06
NME3-206ENST00000564252 CENPWQ5EE01 88 aa15.42■□□□□ 0.06
NME3-206ENST00000564252 LINC00269Q8N2A0 174 aa15.42■□□□□ 0.06
NME3-206ENST00000564252 GNG13Q9P2W3 67 aa15.42■□□□□ 0.06
NME3-206ENST00000564252 DGAT2L7PQ6IED9 249 aa15.41■□□□□ 0.06
NME3-206ENST00000564252 TPPP3Q9BW30 176 aa15.41■□□□□ 0.06
NME3-206ENST00000564252 TRAV1-1A0A0B4J248 108 aa15.4■□□□□ 0.06
NME3-206ENST00000564252 MGPP08493 103 aa15.4■□□□□ 0.06
NME3-206ENST00000564252 C9orf163Q8N9P6 203 aa15.4■□□□□ 0.06
NME3-206ENST00000564252 FER1L6-AS1Q8NA97 138 aa15.4■□□□□ 0.06
NME3-206ENST00000564252 HMCN2Q8NDA2 5059 aa15.39■□□□□ 0.05
NME3-206ENST00000564252 IGHV1-24A0A0C4DH33 117 aa15.39■□□□□ 0.05
NME3-206ENST00000564252 C19orf71A6NCJ1 209 aa15.39■□□□□ 0.05
NME3-206ENST00000564252 SUMO4Q6EEV6 95 aa15.39■□□□□ 0.05
NME3-206ENST00000564252 OR2D3Q8NGH3 330 aa15.39■□□□□ 0.05
NME3-206ENST00000564252 H7C1H1 209 aa15.38■□□□□ 0.05
NME3-206ENST00000564252 OXTP01178 125 aa15.38■□□□□ 0.05
NME3-206ENST00000564252 RPS20P60866 119 aaKnown RBP15.38■□□□□ 0.05
NME3-206ENST00000564252 DAZAP1Q96EP5 407 aaKnown RBP15.37■□□□□ 0.05
NME3-206ENST00000564252 RAB19A4D1S5 217 aa15.36■□□□□ 0.05
NME3-206ENST00000564252 RPL37AP61513 92 aaKnown RBP15.36■□□□□ 0.05
NME3-206ENST00000564252 CACNG7P62955 275 aa15.36■□□□□ 0.05
NME3-206ENST00000564252 REG3AQ06141 175 aa15.36■□□□□ 0.05
NME3-206ENST00000564252 SMIM12Q96EX1 92 aa15.36■□□□□ 0.05
NME3-206ENST00000564252 GNG4P50150 75 aa15.35■□□□□ 0.05
NME3-206ENST00000564252 RAB5CP51148 216 aa15.35■□□□□ 0.05
NME3-206ENST00000564252 C20orf203Q8NBC4 194 aa15.35■□□□□ 0.05
NME3-206ENST00000564252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.35■□□□□ 0.05
NME3-206ENST00000564252 IGLV10-54A0A075B6I4 117 aa15.34■□□□□ 0.05
NME3-206ENST00000564252 NKX2-5P52952 324 aaPredicted RBP15.34■□□□□ 0.05
NME3-206ENST00000564252 F2Z2F3 143 aa15.33■□□□□ 0.04
NME3-206ENST00000564252 PANO1I0J062 215 aa15.33■□□□□ 0.04
NME3-206ENST00000564252 RASL11AQ6T310 242 aa15.33■□□□□ 0.04
NME3-206ENST00000564252 SDIM1Q6ZPB5 146 aa15.33■□□□□ 0.04
NME3-206ENST00000564252 CLRN3Q8NCR9 226 aa15.33■□□□□ 0.04
NME3-206ENST00000564252 TRBV20OR9-2A0A075B6H5 130 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 A0A1B0GUV1 79 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 XKRY2A2RUG3 117 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 P01737 135 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 HNRNPA3P51991 378 aaKnown RBP15.32■□□□□ 0.04
NME3-206ENST00000564252 MEF2BQ02080 365 aaPredicted RBP15.32■□□□□ 0.04
NME3-206ENST00000564252 SERTAD4-AS1Q5TG53 156 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 LYZL1Q6UWQ5 148 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 TMEM243Q9BU79 118 aa15.32■□□□□ 0.04
NME3-206ENST00000564252 IGLV4-60A0A075B6I1 120 aa15.31■□□□□ 0.04
NME3-206ENST00000564252 TEX46H3BTG2 121 aa15.31■□□□□ 0.04
NME3-206ENST00000564252 PDE6DO43924 150 aa15.31■□□□□ 0.04
NME3-206ENST00000564252 PGLYRP4Q96LB8 373 aa15.31■□□□□ 0.04
NME3-206ENST00000564252 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
NME3-206ENST00000564252 TRAV8-4A0A0B4J246 113 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 IFNA1P01562 189 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 TRGC1P0CF51 173 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 SULT1A2P50226 295 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 CNBPP62633 177 aaKnown RBP15.3■□□□□ 0.04
NME3-206ENST00000564252 DPH3P1Q9H4G8 78 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 NIT2Q9NQR4 276 aa15.3■□□□□ 0.04
NME3-206ENST00000564252 NTF3P20783 257 aa15.29■□□□□ 0.04
NME3-206ENST00000564252 EIF5AL1Q6IS14 154 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms