RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 Q9HAA7 133 aa13.35□□□□□ -0.27
CMTM3-207ENST00000564060 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
CMTM3-207ENST00000564060 FAM231DQ6ZW35 169 aa13.34□□□□□ -0.27
CMTM3-207ENST00000564060 DAZ4Q86SG3 579 aaKnown RBP13.34□□□□□ -0.27
CMTM3-207ENST00000564060 NIT1Q86X76 327 aa13.34□□□□□ -0.27
CMTM3-207ENST00000564060 SMIM7Q9BQ49 75 aa13.34□□□□□ -0.27
CMTM3-207ENST00000564060 DAZ3Q9NR90 486 aaKnown RBP13.34□□□□□ -0.27
CMTM3-207ENST00000564060 A0A087WX48 190 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
CMTM3-207ENST00000564060 NTF3P20783 257 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 PKIAP61925 76 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 ELOBQ15370 118 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 DNAJC30Q96LL9 226 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 CNFNQ9BYD5 112 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 DPH3P1Q9H4G8 78 aa13.33□□□□□ -0.28
CMTM3-207ENST00000564060 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
CMTM3-207ENST00000564060 TRBV6-8A0A0A6YYG3 113 aa13.32□□□□□ -0.28
CMTM3-207ENST00000564060 CDK2AP2O75956 126 aa13.32□□□□□ -0.28
CMTM3-207ENST00000564060 ZNF727A8MUV8 499 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 A8MWL6 223 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 TWIST1Q15672 202 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 CT83Q5H943 113 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 TEX261Q6UWH6 196 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 RMI2Q96E14 147 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 COX11Q9Y6N1 276 aa13.31□□□□□ -0.28
CMTM3-207ENST00000564060 M0QY20 66 aa13.3□□□□□ -0.28
CMTM3-207ENST00000564060 SMIM15Q7Z3B0 74 aa13.3□□□□□ -0.28
CMTM3-207ENST00000564060 Q8N3U1 123 aa13.3□□□□□ -0.28
CMTM3-207ENST00000564060 SRP19P09132 144 aaKnown RBP13.29□□□□□ -0.28
CMTM3-207ENST00000564060 SUMO4Q6EEV6 95 aa13.29□□□□□ -0.28
CMTM3-207ENST00000564060 HERC2O95714 4834 aa13.29□□□□□ -0.28
CMTM3-207ENST00000564060 FAM74A3Q4VXF1 159 aa13.28□□□□□ -0.28
CMTM3-207ENST00000564060 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
CMTM3-207ENST00000564060 LINC01551Q86U37 167 aa13.28□□□□□ -0.28
CMTM3-207ENST00000564060 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
CMTM3-207ENST00000564060 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
CMTM3-207ENST00000564060 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
CMTM3-207ENST00000564060 KLK12Q9UKR0 248 aa13.27□□□□□ -0.29
CMTM3-207ENST00000564060 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 Q0VG73 95 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 NTN5Q8WTR8 489 aaPredicted RBP13.26□□□□□ -0.29
CMTM3-207ENST00000564060 FRZBQ92765 325 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 CHCHD5Q9BSY4 110 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 NIT2Q9NQR4 276 aa13.26□□□□□ -0.29
CMTM3-207ENST00000564060 LRCOL1A6NCL2 159 aa13.25□□□□□ -0.29
CMTM3-207ENST00000564060 PEA15Q15121 130 aa13.25□□□□□ -0.29
CMTM3-207ENST00000564060 C15orf54Q8N8G6 183 aa13.25□□□□□ -0.29
CMTM3-207ENST00000564060 OSTCQ9NRP0 149 aa13.25□□□□□ -0.29
CMTM3-207ENST00000564060 LRP1BQ9NZR2 4599 aa13.24□□□□□ -0.29
CMTM3-207ENST00000564060 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
CMTM3-207ENST00000564060 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
CMTM3-207ENST00000564060 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
CMTM3-207ENST00000564060 GFRA4Q9GZZ7 299 aa13.24□□□□□ -0.29
CMTM3-207ENST00000564060 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 CRPP02741 224 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 Q8N814 137 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
CMTM3-207ENST00000564060 IQCJQ1A5X6 159 aa13.22□□□□□ -0.29
CMTM3-207ENST00000564060 MPV17L2Q567V2 206 aa13.22□□□□□ -0.29
CMTM3-207ENST00000564060 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
CMTM3-207ENST00000564060 IGKV2D-24A0A075B6R9 120 aa13.21□□□□□ -0.29
CMTM3-207ENST00000564060 DNAH5Q8TE73 4624 aa13.21□□□□□ -0.3
CMTM3-207ENST00000564060 IGLV5-52A0A0A0MRZ9 124 aa13.2□□□□□ -0.3
CMTM3-207ENST00000564060 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
CMTM3-207ENST00000564060 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
CMTM3-207ENST00000564060 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
CMTM3-207ENST00000564060 ATRAIDQ6UW56 229 aa13.2□□□□□ -0.3
CMTM3-207ENST00000564060 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
CMTM3-207ENST00000564060 GCSHP23434 173 aa13.19□□□□□ -0.3
CMTM3-207ENST00000564060 ISOC2Q96AB3 205 aa13.19□□□□□ -0.3
CMTM3-207ENST00000564060 C1orf43Q9BWL3 253 aa13.19□□□□□ -0.3
CMTM3-207ENST00000564060 FUSP35637 526 aaKnown RBP eCLIP13.18□□□□□ -0.3
CMTM3-207ENST00000564060 RPL23P62829 140 aaKnown RBP13.18□□□□□ -0.3
CMTM3-207ENST00000564060 COTL1Q14019 142 aa13.18□□□□□ -0.3
CMTM3-207ENST00000564060 ADIRFQ15847 76 aa13.18□□□□□ -0.3
CMTM3-207ENST00000564060 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
CMTM3-207ENST00000564060 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
CMTM3-207ENST00000564060 GAGE6Q13070 117 aa13.17□□□□□ -0.3
CMTM3-207ENST00000564060 MIAQ16674 131 aa13.17□□□□□ -0.3
CMTM3-207ENST00000564060 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
CMTM3-207ENST00000564060 V9GYV3 84 aa13.17□□□□□ -0.3
CMTM3-207ENST00000564060 RBX1P62877 108 aa13.16□□□□□ -0.3
CMTM3-207ENST00000564060 Q8N976 141 aa13.16□□□□□ -0.3
CMTM3-207ENST00000564060 RYR1P21817 5038 aa13.16□□□□□ -0.3
CMTM3-207ENST00000564060 TRAV26-2A0A0B4J265 109 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 C9JQL5 133 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 UBE2L6O14933 153 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 RAB14P61106 215 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 RIGQ13278 110 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 ENHOQ6UWT2 76 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 NAT8BQ9UHF3 227 aa13.15□□□□□ -0.3
CMTM3-207ENST00000564060 AMTP48728 403 aa13.14□□□□□ -0.31
CMTM3-207ENST00000564060 SRSF3P84103 164 aaKnown RBP13.14□□□□□ -0.31
CMTM3-207ENST00000564060 BAALCQ8WXS3 180 aa13.14□□□□□ -0.31
CMTM3-207ENST00000564060 A0A1B0GUV1 79 aa13.13□□□□□ -0.31
CMTM3-207ENST00000564060 LECT2O14960 151 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms