RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 SCGB1D4Q6XE38 83 aa14.72□□□□□ -0.05
MSLN-205ENST00000563941 KLHL30-AS1Q8NEE0 82 aa14.71□□□□□ -0.05
MSLN-205ENST00000563941 A0A1B0GWB2 263 aa14.71□□□□□ -0.06
MSLN-205ENST00000563941 MXRA5Q9NR99 2828 aa14.7□□□□□ -0.06
MSLN-205ENST00000563941 HTN1P15515 57 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 ZNRF2Q8NHG8 242 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 Q96MF0 132 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 A8MTW9 85 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 P0DMU3 169 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 FAM231AP0DMU4 169 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 FAM231CP0DMU5 169 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 TMEM170BQ5T4T1 132 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 NAV2Q8IVL1 2488 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 DUX3Q96PT4 197 aa14.69□□□□□ -0.06
MSLN-205ENST00000563941 H3BMM0 161 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 I3L3M4 83 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 LRRC75A-AS1Q8N1F1 130 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 RBMY1BA6NDE4 496 aaKnown RBP14.68□□□□□ -0.06
MSLN-205ENST00000563941 RBMY1EA6NEQ0 496 aaKnown RBP14.68□□□□□ -0.06
MSLN-205ENST00000563941 RBMY1DP0C7P1 496 aaKnown RBP14.68□□□□□ -0.06
MSLN-205ENST00000563941 RRN3P1Q2M238 152 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 TMEM61Q8N0U2 210 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 OPRPNQ99935 248 aaPredicted RBP14.68□□□□□ -0.06
MSLN-205ENST00000563941 PEMTQ9UBM1 199 aa14.68□□□□□ -0.06
MSLN-205ENST00000563941 KHDC1LQ5JSQ8 128 aa14.67□□□□□ -0.06
MSLN-205ENST00000563941 C20orf203Q8NBC4 194 aa14.67□□□□□ -0.06
MSLN-205ENST00000563941 C4orf3Q8WVX3 66 aa14.67□□□□□ -0.06
MSLN-205ENST00000563941 TRAV2A0A0B4J234 112 aa14.66□□□□□ -0.06
MSLN-205ENST00000563941 SRSF9Q13242 221 aaKnown RBP eCLIP14.66□□□□□ -0.06
MSLN-205ENST00000563941 TSPEAR-AS2P59090 65 aa14.66□□□□□ -0.06
MSLN-205ENST00000563941 IGHV3-73A0A0B4J1V6 119 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 CHD6Q8TD26 2715 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 TMEM238LA0A1B0GVL6 79 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 A6NJY4 79 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 G3V4G9 280 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 NFE4Q86UQ8 179 aa14.65□□□□□ -0.06
MSLN-205ENST00000563941 A0A0J9YY99 117 aa14.64□□□□□ -0.07
MSLN-205ENST00000563941 DLX4Q92988 240 aaPredicted RBP14.64□□□□□ -0.07
MSLN-205ENST00000563941 EDA2RQ9HAV5 297 aa14.64□□□□□ -0.07
MSLN-205ENST00000563941 PRM2P04554 102 aa14.63□□□□□ -0.07
MSLN-205ENST00000563941 DYNLRB2Q8TF09 96 aa14.63□□□□□ -0.07
MSLN-205ENST00000563941 MAP6D1Q9H9H5 199 aa14.63□□□□□ -0.07
MSLN-205ENST00000563941 PROK1P58294 105 aa14.63□□□□□ -0.07
MSLN-205ENST00000563941 SPAG8Q99932 426 aaPredicted RBP14.63□□□□□ -0.07
MSLN-205ENST00000563941 APCP25054 2843 aa14.63□□□□□ -0.07
MSLN-205ENST00000563941 HIST2H2BDQ6DRA6 164 aa14.62□□□□□ -0.07
MSLN-205ENST00000563941 KRTAP1-3Q8IUG1 177 aa14.62□□□□□ -0.07
MSLN-205ENST00000563941 CREBBPQ92793 2442 aa14.62□□□□□ -0.07
MSLN-205ENST00000563941 TEX15Q9BXT5 2789 aa14.62□□□□□ -0.07
MSLN-205ENST00000563941 M0R2P5 195 aa14.62□□□□□ -0.07
MSLN-205ENST00000563941 IGLV4-3A0A075B6K6 122 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 H3BMG7 143 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 J3QQQ9 107 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 UBE2D1P51668 147 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 ZNF415Q09FC8 603 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 PGPEP1Q9NXJ5 209 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 TENM4Q6N022 2769 aa14.61□□□□□ -0.07
MSLN-205ENST00000563941 AMELXQ99217 191 aa14.6□□□□□ -0.07
MSLN-205ENST00000563941 NBPF19A0A087WUL8 3843 aa14.6□□□□□ -0.07
MSLN-205ENST00000563941 TMEM223A0PJW6 202 aa14.6□□□□□ -0.07
MSLN-205ENST00000563941 A8MWV9 139 aa14.6□□□□□ -0.07
MSLN-205ENST00000563941 LGALS3P17931 250 aaKnown RBP14.6□□□□□ -0.07
MSLN-205ENST00000563941 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
MSLN-205ENST00000563941 SPANXB1Q9NS25 103 aaPredicted RBP14.6□□□□□ -0.07
MSLN-205ENST00000563941 MRPL16Q9NX20 251 aaKnown RBP14.6□□□□□ -0.07
MSLN-205ENST00000563941 F8W1H4 67 aa14.59□□□□□ -0.07
MSLN-205ENST00000563941 DEFB114Q30KQ6 69 aa14.59□□□□□ -0.07
MSLN-205ENST00000563941 VCX2Q9H322 139 aa14.59□□□□□ -0.07
MSLN-205ENST00000563941 NACAE9PAV3 2078 aa14.59□□□□□ -0.07
MSLN-205ENST00000563941 TEX48A0A1B0GUV7 120 aa14.58□□□□□ -0.08
MSLN-205ENST00000563941 ZNF22P17026 224 aaPredicted RBP14.58□□□□□ -0.08
MSLN-205ENST00000563941 PIK3CD-AS1Q5SR53 167 aa14.58□□□□□ -0.08
MSLN-205ENST00000563941 SLC25A29Q8N8R3 303 aa14.58□□□□□ -0.08
MSLN-205ENST00000563941 RAX2Q96IS3 184 aa14.58□□□□□ -0.08
MSLN-205ENST00000563941 TNFRSF18Q9Y5U5 241 aa14.58□□□□□ -0.08
MSLN-205ENST00000563941 A0A0J9YXV3 536 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 LEPROTO15243 131 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 WFDC2Q14508 124 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 RHODO00212 210 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 CD28P10747 220 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 LINC01587Q99440 93 aa14.57□□□□□ -0.08
MSLN-205ENST00000563941 IGHV3-30P01768 117 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 IGHV3-30-5P0DP03 117 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 Q6ZSN1 163 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 Q6ZSV7 163 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 TMEM86BQ8N661 226 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 PTH2Q96A98 100 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 PYGO1Q9Y3Y4 419 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 APOMO95445 188 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 C11orf72Q8NBR9 251 aa14.56□□□□□ -0.08
MSLN-205ENST00000563941 TSPAN13O95857 204 aa14.55□□□□□ -0.08
MSLN-205ENST00000563941 INSP01308 110 aa14.55□□□□□ -0.08
MSLN-205ENST00000563941 LINC00467Q9BRT7 94 aa14.55□□□□□ -0.08
MSLN-205ENST00000563941 Q9UF83 564 aa14.55□□□□□ -0.08
MSLN-205ENST00000563941 IGHV3-64A0A075B6Q5 118 aa14.54□□□□□ -0.08
MSLN-205ENST00000563941 GAGE13Q4V321 117 aa14.54□□□□□ -0.08
MSLN-205ENST00000563941 FAM104AQ969W3 186 aa14.54□□□□□ -0.08
MSLN-205ENST00000563941 NDUFA11Q86Y39 141 aa14.54□□□□□ -0.08
MSLN-205ENST00000563941 CEMP1Q6PRD7 247 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms