RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 BIN3Q9NQY0 253 aa3.54□□□□□ -1.84
HERPUD1-208ENST00000563911 SHPKQ9UHJ6 478 aa3.54□□□□□ -1.84
HERPUD1-208ENST00000563911 A0A1B0GW15 77 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 RBFOX3A6NFN3 312 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 MPDU1O75352 247 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 TNFAIP8O95379 198 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 PPBPP02775 128 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 RAB11AP62491 216 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 AKR1C1Q04828 323 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 ZNF846Q147U1 533 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 SPANXN5Q5MJ07 72 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 IBA57Q5T440 356 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 LCN15Q6UWW0 184 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 DPPA3Q6W0C5 159 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 LINC00305Q7Z4B0 112 aa3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 SDHCQ99643 169 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 NAA50Q9GZZ1 169 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 RSL24D1Q9UHA3 163 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 C14orf166Q9Y224 244 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-208ENST00000563911 IGKV2-40A0A087WW87 121 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 GNRH2O43555 120 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SYNGR2O43760 224 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 IGKV2D-40P01614 121 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 AKR1C4P17516 323 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 CXCL2P19875 107 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SURF2Q15527 256 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 Q6ZRU5 148 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 EXOC3-AS1Q8N2X6 119 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SLC25A29Q8N8R3 303 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 RAB2BQ8WUD1 216 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 MGST2Q99735 147 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SLC50A1Q9BRV3 221 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SLC25A31Q9H0C2 315 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 GEMIN7Q9H840 131 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 RAB26Q9ULW5 256 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 FLVCR2Q9UPI3 526 aa3.52□□□□□ -1.85
HERPUD1-208ENST00000563911 SMLR1H3BR10 107 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 K7EPK0 472 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 ARPC5O15511 151 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 TSPAN13O95857 204 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 ORM1P02763 201 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 GPX1P07203 203 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 UBE2AP49459 152 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 OR10J3Q5JRS4 329 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 Q6ZVH6 145 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 Q8TAT8 98 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 LINC01600Q96MT4 127 aa3.51□□□□□ -1.85
HERPUD1-208ENST00000563911 TRBV19A0A075B6N1 114 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 TRAV4A0A0B4J268 109 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 C9orf170A2RU37 121 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 FABP12A6NFH5 140 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 METTL15P1P0C7V9 234 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 PYYP10082 97 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 HERVK_113P61574 105 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 RBX1P62877 108 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 TRIQKQ629K1 86 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 TMEM14EPQ6UXP3 125 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 LINC01551Q86U37 167 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 BPIFA4PQ86YQ2 179 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 DYNC2LI1Q8TCX1 351 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 FAM104AQ969W3 186 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 SMIM12Q96EX1 92 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 TXNDC17Q9BRA2 123 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 NIT2Q9NQR4 276 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 ZNF492Q9P255 531 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 PXMP4Q9Y6I8 212 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 URGCP-MRPS24S4R325 110 aa3.5□□□□□ -1.85
HERPUD1-208ENST00000563911 A0A096LNJ9 63 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 IGHV3-73A0A0B4J1V6 119 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 TRAV8-6A0A0B4J262 113 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 ANKRD20A5PA0PJZ0 165 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 DISC1C4P0D8 188 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 C9JCJ5 164 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 DLEU1O43261 78 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 LINC00694P0DN24 101 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 SLC25A6P12236 298 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 ACOT6Q3I5F7 207 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 GCSAMLQ5JQS6 135 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 MIC13Q5XKP0 118 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 SDIM1Q6ZPB5 146 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 Q8N976 141 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 OR4C5Q8NGB2 326 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 SMIM4Q8WVI0 70 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 MRPS26Q9BYN8 205 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 SRRQ9GZT4 340 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 NPVFQ9HCQ7 196 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 PSENENQ9NZ42 101 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 GSKIPQ9P0R6 139 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 CACFD1Q9UGQ2 172 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
HERPUD1-208ENST00000563911 TEX46H3BTG2 121 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 NMBP08949 121 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 AKAIN1P0CW23 69 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 SCGB1A1P11684 91 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms