RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 SNCGO76070 127 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 EDDM3BP56851 147 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 COPZ1P61923 177 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 SMCO1Q147U7 214 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 SPTSSAQ969W0 71 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 CELSR2Q9HCU4 2923 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 TMEM2Q9UHN6 1383 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 KMT2DO14686 5537 aa0.17□□□□□ -2.38
SCAPER-208ENST00000563688 ADGRB1O14514 1584 aa0.16□□□□□ -2.38
SCAPER-208ENST00000563688 UBR5O95071 2799 aaPredicted RBP0.16□□□□□ -2.38
SCAPER-208ENST00000563688 GUCA1AP43080 201 aaPredicted RBP0.16□□□□□ -2.38
SCAPER-208ENST00000563688 RPS25P62851 125 aaKnown RBP0.16□□□□□ -2.38
SCAPER-208ENST00000563688 KCNRGQ8N5I3 272 aa0.16□□□□□ -2.38
SCAPER-208ENST00000563688 DAPK1P53355 1430 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 NDUFB6O95139 128 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 CBLN1P23435 193 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 UBE2D1P51668 147 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 INSL4Q14641 139 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 SPTSSBQ8NFR3 76 aa0.15□□□□□ -2.39
SCAPER-208ENST00000563688 IBTKQ9P2D0 1353 aaPredicted RBP0.15□□□□□ -2.39
SCAPER-208ENST00000563688 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
SCAPER-208ENST00000563688 FAM92AA1XBS5 289 aa0.14□□□□□ -2.39
SCAPER-208ENST00000563688 S100A7L2Q5SY68 101 aa0.14□□□□□ -2.39
SCAPER-208ENST00000563688 TCEAL4Q96EI5 215 aa0.14□□□□□ -2.39
SCAPER-208ENST00000563688 PFDN5Q99471 154 aa0.14□□□□□ -2.39
SCAPER-208ENST00000563688 SPTBN2O15020 2390 aa0.14□□□□□ -2.39
SCAPER-208ENST00000563688 ANK2Q01484 3957 aa0.13□□□□□ -2.39
SCAPER-208ENST00000563688 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
SCAPER-208ENST00000563688 MYH9P35579 1960 aaKnown RBP0.12□□□□□ -2.39
SCAPER-208ENST00000563688 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
SCAPER-208ENST00000563688 APOC4-APOC2K7ER74 178 aa0.12□□□□□ -2.39
SCAPER-208ENST00000563688 SMIM6P0DI80 62 aa0.12□□□□□ -2.39
SCAPER-208ENST00000563688 UBE2DNLQ8IWF7 75 aa0.12□□□□□ -2.39
SCAPER-208ENST00000563688 TMEM191AQ9H0A3 160 aa0.12□□□□□ -2.39
SCAPER-208ENST00000563688 TRAV1-2A0A0B4J238 106 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 CLPSL1A2RUU4 121 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 ZNF818PQ6ZRF7 136 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 SDF2Q99470 211 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 WFDC6Q9BQY6 131 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 SEC11CQ9BY50 192 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 CHD9Q3L8U1 2897 aa0.11□□□□□ -2.39
SCAPER-208ENST00000563688 SPEF2Q9C093 1822 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 NBPF19A0A087WUL8 3843 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 BSNQ9UPA5 3926 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 CCDC167Q9P0B6 97 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 PAIP2BQ9ULR5 123 aaKnown RBP0.1□□□□□ -2.39
SCAPER-208ENST00000563688 MYH8P13535 1937 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 ZFHX4Q86UP3 3567 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 ZFHX3Q15911 3703 aa0.1□□□□□ -2.39
SCAPER-208ENST00000563688 LAMA5O15230 3695 aa0.09□□□□□ -2.39
SCAPER-208ENST00000563688 TRRAPQ9Y4A5 3859 aa0.09□□□□□ -2.39
SCAPER-208ENST00000563688 TRBV10-3A0A0K0K1G6 114 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 LINC00312Q9Y6C7 94 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 MYO15AQ9UKN7 3530 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 KMT2AQ03164 3969 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 SIPA1L3O60292 1781 aaPredicted RBP0.09□□□□□ -2.4
SCAPER-208ENST00000563688 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.4
SCAPER-208ENST00000563688 FAM208BQ5VWN6 2430 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 GPR98Q8WXG9 6306 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH7Q8WXX0 4024 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 AKAP9Q99996 3911 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 C10orf142B7Z368 130 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 CCL8P80075 99 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 SSBP3-AS1Q7Z2R9 100 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 U3KQA8 63 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 SPTBN5Q9NRC6 3674 aaKnown RBP0.08□□□□□ -2.4
SCAPER-208ENST00000563688 CSMD1Q96PZ7 3565 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 GOLGA3Q08378 1498 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 PLCE1Q9P212 2302 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 SMG1Q96Q15 3661 aaKnown RBP0.08□□□□□ -2.4
SCAPER-208ENST00000563688 PCLOQ9Y6V0 5065 aa0.08□□□□□ -2.4
SCAPER-208ENST00000563688 ABCA2Q9BZC7 2435 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 LYSTQ99698 3801 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 PI4KAP42356 2102 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 ZNF815PA8K554 130 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 IFITM1P13164 125 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 ARPC4P59998 168 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 DPH3Q96FX2 82 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 LRP2P98164 4655 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 RYR3Q15413 4870 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 HYDINQ4G0P3 5121 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 HUWE1Q7Z6Z7 4374 aaKnown RBP0.07□□□□□ -2.4
SCAPER-208ENST00000563688 CUBNO60494 3623 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 DNHD1Q96M86 4753 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 SPENQ96T58 3664 aaKnown RBP0.07□□□□□ -2.4
SCAPER-208ENST00000563688 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 CSMD3Q7Z407 3707 aa0.07□□□□□ -2.4
SCAPER-208ENST00000563688 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
SCAPER-208ENST00000563688 FAT1Q14517 4588 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 ZNF292O60281 2723 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 ZNF518AQ6AHZ1 1483 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 AKAP6Q13023 2319 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 PTPRQQ9UMZ3 2332 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms