RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NRXN2Q9P2S2 1712 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 DLEU1O43261 78 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 GNG7O60262 68 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 SIX6O95475 246 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 LY6G6CO95867 125 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 TNFP01375 233 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 UBE2G1P62253 170 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 Q56UQ5 140 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 C20orf197Q8N268 126 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 PP6455Q8WZ26 134 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 C2orf88Q9BSF0 95 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 PDCD10Q9BUL8 212 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 BPESC1Q9GZL8 116 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 SCP2D1Q9UJQ7 156 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 V9GYV3 84 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 MYH7P12883 1935 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 SIPA1L3O60292 1781 aaPredicted RBP0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 KMT2DO14686 5537 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 PARP14Q460N5 1801 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 GVQW2A0A096LPI5 108 aaPredicted RBP0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 A6NIN4 97 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 APOC4-APOC2K7ER74 178 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 SNCGO76070 127 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 MEIG1Q5JSS6 88 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 C6orf52Q5T4I8 152 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 Q8N8P6 123 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 C10orf82Q8WW14 230 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 TMEM203Q969S6 136 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 Q96NJ1 140 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 WFDC6Q9BQY6 131 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 SEC11CQ9BY50 192 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 QRICH2Q9H0J4 1663 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM135AQ9P2D6 1515 aa0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 EIF4G3O43432 1585 aaKnown RBP0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 ROCK2O75116 1388 aaKnown RBP0.32□□□□□ -2.36
HMGB1P33-201ENST00000563485 DOCK11Q5JSL3 2073 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 RIMS1Q86UR5 1692 aaKnown RBP0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 MEGF8Q7Z7M0 2845 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM25AB3EWG3 89 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM25CB3EWG5 89 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM25GB3EWG6 89 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 TFF1P04155 84 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 HIST1H1DP16402 221 aaKnown RBP0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 SPINK7P58062 85 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 RPL7L1Q6DKI1 246 aaKnown RBP0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 VMO1Q7Z5L0 202 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 C8orf59Q8N0T1 100 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 SMIM11BQ8TCY0 68 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 LSM10Q969L4 123 aaKnown RBP0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 PPP3R2Q96LZ3 170 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 IER3IP1Q9Y5U9 82 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 LAMC3Q9Y6N6 1575 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
HMGB1P33-201ENST00000563485 LOC285556D6RIA3 1793 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 LOC100130705A0A1B0GUX0 176 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 IFNGP01579 166 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 APOC2P02655 101 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 AKAIN1P0CW23 69 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 PI4KAP42356 2102 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 EDDM3BP56851 147 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 INSL4Q14641 139 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 CYP4F30PQ9H0H9 118 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 PROK2Q9HC23 129 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 LINC00312Q9Y6C7 94 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 SSC5DA1L4H1 1573 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 PEG3Q9GZU2 1588 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 NWD2Q9ULI1 1742 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
HMGB1P33-201ENST00000563485 RBBP6Q7Z6E9 1792 aaKnown RBP0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 MAPKBP1O60336 1514 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 TRAV13-2A0A0B4J235 113 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 A0A1B0GV90 55 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 TMEM14DPA8MWL7 114 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 F2Z2F3 143 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 CORTO00230 105 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 PIN1P1O15428 100 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 SSSCA1O60232 199 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 SCN3BQ9NY72 215 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 LENEPQ9Y5L5 61 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 TNS1Q9HBL0 1735 aaKnown RBP0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 KTN1Q86UP2 1357 aaKnown RBP0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 PATJQ8NI35 1801 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 SPEF2Q9C093 1822 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 PPIP5K1Q6PFW1 1433 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 MYOM2P54296 1465 aa0.29□□□□□ -2.36
HMGB1P33-201ENST00000563485 UNC13BO14795 1591 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 ABCA12Q86UK0 2595 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 LINC00587B1AMM8 73 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 PRH1P02810 166 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 CCL18P55774 89 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 Q6ZRX8 168 aa0.28□□□□□ -2.36
HMGB1P33-201ENST00000563485 COMMD6Q7Z4G1 85 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms