RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ATP6V0E2Q8NHE4 81 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 MRAP2Q96G30 205 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 DNAJC30Q96LL9 226 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 TNFRSF18Q9Y5U5 241 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 LY6G6CO95867 125 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 RAB4AP20338 218 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 FAM104BQ5XKR9 115 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 RNF185Q96GF1 192 aa13.03□□□□□ -0.32
RAB40C-207ENST00000563109 PLECQ15149 4684 aaKnown RBP13.02□□□□□ -0.32
RAB40C-207ENST00000563109 TENM2Q9NT68 2774 aa13.02□□□□□ -0.32
RAB40C-207ENST00000563109 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
RAB40C-207ENST00000563109 Q9UF83 564 aa13.02□□□□□ -0.33
RAB40C-207ENST00000563109 UBE2D3P61077 147 aa13.01□□□□□ -0.33
RAB40C-207ENST00000563109 UBE2D2P62837 147 aa13.01□□□□□ -0.33
RAB40C-207ENST00000563109 ESRGQ1W209 222 aa13.01□□□□□ -0.33
RAB40C-207ENST00000563109 ATRAIDQ6UW56 229 aa13.01□□□□□ -0.33
RAB40C-207ENST00000563109 TIRAPP58753 221 aa13□□□□□ -0.33
RAB40C-207ENST00000563109 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
RAB40C-207ENST00000563109 OR10J3Q5JRS4 329 aa13□□□□□ -0.33
RAB40C-207ENST00000563109 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
RAB40C-207ENST00000563109 GTSF1LQ9H1H1 148 aa13□□□□□ -0.33
RAB40C-207ENST00000563109 MRPS16Q9Y3D3 137 aaKnown RBP13□□□□□ -0.33
RAB40C-207ENST00000563109 LINC00588Q9Y4M8 146 aa13□□□□□ -0.33
RAB40C-207ENST00000563109 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
RAB40C-207ENST00000563109 LCE6AA0A183 80 aa12.99□□□□□ -0.33
RAB40C-207ENST00000563109 PPP1R17O96001 155 aa12.99□□□□□ -0.33
RAB40C-207ENST00000563109 COX19Q49B96 90 aa12.99□□□□□ -0.33
RAB40C-207ENST00000563109 SMCO4Q9NRQ5 59 aa12.99□□□□□ -0.33
RAB40C-207ENST00000563109 NCR2O95944 276 aa12.98□□□□□ -0.33
RAB40C-207ENST00000563109 CKS2P33552 79 aa12.98□□□□□ -0.33
RAB40C-207ENST00000563109 DAZ4Q86SG3 579 aaKnown RBP12.98□□□□□ -0.33
RAB40C-207ENST00000563109 RPL39LQ96EH5 51 aaKnown RBP12.98□□□□□ -0.33
RAB40C-207ENST00000563109 DAZ3Q9NR90 486 aaKnown RBP12.98□□□□□ -0.33
RAB40C-207ENST00000563109 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
RAB40C-207ENST00000563109 PPBPP02775 128 aa12.97□□□□□ -0.33
RAB40C-207ENST00000563109 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 HLA-DQA1P01909 254 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 ELOBQ15370 118 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 TMEM97Q5BJF2 176 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 TMEM136Q6ZRR5 245 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
RAB40C-207ENST00000563109 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 TRAV8-6A0A0B4J262 113 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 TRBV6-5A0A0K0K1A5 114 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 D6R8Y8 96 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 LELP1Q5T871 98 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 CBLN2Q8IUK8 224 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 ORMDL3Q8N138 153 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
RAB40C-207ENST00000563109 TRBV24-1A0A075B6N3 115 aa12.94□□□□□ -0.34
RAB40C-207ENST00000563109 GAS8-AS1O95177 125 aa12.94□□□□□ -0.34
RAB40C-207ENST00000563109 MT-ND6P03923 174 aa12.94□□□□□ -0.34
RAB40C-207ENST00000563109 RPS10P46783 165 aaKnown RBP12.94□□□□□ -0.34
RAB40C-207ENST00000563109 SDHAF1A6NFY7 115 aa12.93□□□□□ -0.34
RAB40C-207ENST00000563109 APCSP02743 223 aa12.93□□□□□ -0.34
RAB40C-207ENST00000563109 NRACQ8N912 160 aa12.93□□□□□ -0.34
RAB40C-207ENST00000563109 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
RAB40C-207ENST00000563109 COTL1Q14019 142 aa12.92□□□□□ -0.34
RAB40C-207ENST00000563109 PRELID3AQ96N28 172 aa12.92□□□□□ -0.34
RAB40C-207ENST00000563109 LYSTQ99698 3801 aa12.92□□□□□ -0.34
RAB40C-207ENST00000563109 PHOX2AO14813 284 aa12.91□□□□□ -0.34
RAB40C-207ENST00000563109 S100A1P23297 94 aa12.91□□□□□ -0.34
RAB40C-207ENST00000563109 SUMO2P61956 95 aaKnown RBP12.91□□□□□ -0.34
RAB40C-207ENST00000563109 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
RAB40C-207ENST00000563109 TRBV25-1A0A075B6N4 114 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 I3L3M4 83 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 SIVA1O15304 175 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 PMCHP20382 165 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 YPEL4Q96NS1 127 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 C20orf78Q9BR46 151 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 TMEM70Q9BUB7 260 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 Q9H8V8 135 aa12.9□□□□□ -0.34
RAB40C-207ENST00000563109 WFDC10BQ8IUB3 73 aa12.89□□□□□ -0.35
RAB40C-207ENST00000563109 MRPL18Q9H0U6 180 aaKnown RBP12.89□□□□□ -0.35
RAB40C-207ENST00000563109 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 VCYO14598 125 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 NPYP01303 97 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 TRAPPC1Q9Y5R8 145 aa12.88□□□□□ -0.35
RAB40C-207ENST00000563109 AMTP48728 403 aa12.87□□□□□ -0.35
RAB40C-207ENST00000563109 POLR2KP53803 58 aaKnown RBP12.87□□□□□ -0.35
RAB40C-207ENST00000563109 KIR2DL4Q99706 377 aa12.87□□□□□ -0.35
RAB40C-207ENST00000563109 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
RAB40C-207ENST00000563109 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 PKIAP61925 76 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 RPL32P62910 135 aaKnown RBP12.86□□□□□ -0.35
RAB40C-207ENST00000563109 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 NTM-AS1Q6ZSK4 140 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 CHCHD5Q9BSY4 110 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 SMIM2Q9BVW6 85 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms