RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
SF3B3-203ENST00000562874 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
SF3B3-203ENST00000562874 TRAV1-1A0A0B4J248 108 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 CRPP02741 224 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 IGLC6P0CF74 106 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 MEF2BQ02080 365 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-203ENST00000562874 Q8N976 141 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
SF3B3-203ENST00000562874 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 ANGP03950 147 aaKnown RBP10.32□□□□□ -0.76
SF3B3-203ENST00000562874 GNG4P50150 75 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 RAB5CP51148 216 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 ELOBQ15370 118 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 Q6ZSA8 131 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 NTM-AS1Q6ZSK4 140 aa10.32□□□□□ -0.76
SF3B3-203ENST00000562874 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 TEX46H3BTG2 121 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 EIF5AL1Q6IS14 154 aaKnown RBP10.31□□□□□ -0.76
SF3B3-203ENST00000562874 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 TCTE3Q8IZS6 198 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 DAZAP1Q96EP5 407 aaKnown RBP10.31□□□□□ -0.76
SF3B3-203ENST00000562874 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
SF3B3-203ENST00000562874 IFNA1P01562 189 aa10.3□□□□□ -0.76
SF3B3-203ENST00000562874 C1QBP02746 253 aa10.3□□□□□ -0.76
SF3B3-203ENST00000562874 BCL2P10415 239 aa10.3□□□□□ -0.76
SF3B3-203ENST00000562874 GAGE6Q13070 117 aa10.3□□□□□ -0.76
SF3B3-203ENST00000562874 MED9Q9NWA0 146 aa10.3□□□□□ -0.76
SF3B3-203ENST00000562874 P01737 135 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 Q0VG73 95 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-203ENST00000562874 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
SF3B3-203ENST00000562874 PDE6DO43924 150 aa10.28□□□□□ -0.76
SF3B3-203ENST00000562874 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
SF3B3-203ENST00000562874 SLC51BQ86UW2 128 aa10.28□□□□□ -0.76
SF3B3-203ENST00000562874 hCG_2014768A0A024R1R8 64 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 M0QY20 66 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-203ENST00000562874 CACNG7P62955 275 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 LYZL1Q6UWQ5 148 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
SF3B3-203ENST00000562874 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-203ENST00000562874 RBX1P62877 108 aa10.26□□□□□ -0.77
SF3B3-203ENST00000562874 HERC1Q15751 4861 aa10.25□□□□□ -0.77
SF3B3-203ENST00000562874 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
SF3B3-203ENST00000562874 TMEM97Q5BJF2 176 aa10.25□□□□□ -0.77
SF3B3-203ENST00000562874 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
SF3B3-203ENST00000562874 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
SF3B3-203ENST00000562874 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
SF3B3-203ENST00000562874 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 XKRY2A2RUG3 117 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 H7C1H1 209 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 K7EN84 100 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 NTF3P20783 257 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 CTRLP40313 264 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 PKIAP61925 76 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 MIAQ16674 131 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
SF3B3-203ENST00000562874 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
SF3B3-203ENST00000562874 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
SF3B3-203ENST00000562874 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
SF3B3-203ENST00000562874 RASL11AQ6T310 242 aa10.23□□□□□ -0.77
SF3B3-203ENST00000562874 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
SF3B3-203ENST00000562874 RPP21Q9H633 154 aaKnown RBP10.23□□□□□ -0.77
SF3B3-203ENST00000562874 F2Z2F3 143 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 PLA2G1BP04054 148 aaKnown RBP10.22□□□□□ -0.77
SF3B3-203ENST00000562874 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 Q6ZNX1 250 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 AKAP14Q86UN6 197 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 CIRBP-AS1Q8TBR5 109 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 BIN3Q9NQY0 253 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
SF3B3-203ENST00000562874 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 PRSS1P07477 247 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 REG3AQ06141 175 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 TWIST1Q15672 202 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 OCC1Q8TAD7 63 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 CHAC1Q9BUX1 264 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 GFRA4Q9GZZ7 299 aa10.21□□□□□ -0.77
SF3B3-203ENST00000562874 TAGLN2P37802 199 aaKnown RBP10.19□□□□□ -0.78
SF3B3-203ENST00000562874 CEBPGP53567 150 aa10.19□□□□□ -0.78
SF3B3-203ENST00000562874 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms