RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 DOCK11Q5JSL3 2073 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 TRBV7-1A0A0A6YYK4 115 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 F2Z2F3 143 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 NDUFB6O95139 128 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 IL5P05113 134 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 HMGN1P05114 100 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 PIPP12273 146 aaPredicted RBP0.14□□□□□ -2.39
CHD9-204ENST00000561869 CBLN1P23435 193 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 UBE2G1P62253 170 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 ZNF818PQ6ZRF7 136 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 KCNRGQ8N5I3 272 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 RPRMQ9NS64 109 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 V9GYV3 84 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 ZNF518AQ6AHZ1 1483 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 IFT140Q96RY7 1462 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 UNC13BO14795 1591 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 PTPRZ1P23471 2315 aaPredicted RBP0.14□□□□□ -2.39
CHD9-204ENST00000561869 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
CHD9-204ENST00000561869 ASXL3Q9C0F0 2248 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 TRBV10-3A0A0K0K1G6 114 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 K7EP13 123 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 EDDM3BP56851 147 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 SELENOWP63302 87 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 CCL8P80075 99 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 SPTSSAQ969W0 71 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 WFDC6Q9BQY6 131 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 BCL9LQ86UU0 1499 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 PXDNQ92626 1479 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 SIPA1L3O60292 1781 aaPredicted RBP0.13□□□□□ -2.39
CHD9-204ENST00000561869 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 PARP14Q460N5 1801 aa0.13□□□□□ -2.39
CHD9-204ENST00000561869 MAST4O15021 2626 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 CFTRP13569 1480 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 SPAARA0A1B0GVQ0 90 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 FAM92AA1XBS5 289 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 TMEM14DPA8MWL7 114 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 INSL4Q14641 139 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 CCDC58Q4VC31 144 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 Q5VV11 94 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 RPL7L1Q6DKI1 246 aaKnown RBP0.12□□□□□ -2.39
CHD9-204ENST00000561869 Q6ZRX8 168 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 SNRNP25Q9BV90 132 aaKnown RBP0.12□□□□□ -2.39
CHD9-204ENST00000561869 LINC00470Q9BZP3 86 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 LRRC37A3O60309 1634 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 CHD9Q3L8U1 2897 aa0.12□□□□□ -2.39
CHD9-204ENST00000561869 IGF2RP11717 2491 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 GOLGA3Q08378 1498 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 TRGV1A0A0A0MS02 117 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 A6NIN4 97 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 APOC4-APOC2K7ER74 178 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 SNCGO76070 127 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 APODP05090 189 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 NMBP08949 121 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 BTG2P78543 158 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 Q6AWC8 147 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 ARL11Q969Q4 196 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 AGPAT4-IT1Q9H0P7 198 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 RERGLQ9H628 205 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 CASKIN1Q8WXD9 1431 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 FAM208BQ5VWN6 2430 aa0.11□□□□□ -2.39
CHD9-204ENST00000561869 ARFGEF1Q9Y6D6 1849 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 PHLPP1O60346 1717 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 ZMYM4Q5VZL5 1548 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 G3V318 75 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 SIX6O95475 246 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 ACYP2P14621 99 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 HIST1H1DP16402 221 aaKnown RBP0.1□□□□□ -2.39
CHD9-204ENST00000561869 C12orf73Q69YU5 71 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 Q8N8P6 123 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 C1orf54Q8WWF1 131 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 COPS9Q8WXC6 57 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 LSM10Q969L4 123 aaKnown RBP0.1□□□□□ -2.39
CHD9-204ENST00000561869 PDCD10Q9BUL8 212 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 LINC00312Q9Y6C7 94 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 FOCADQ5VW36 1801 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 MBD5Q9P267 1494 aa0.1□□□□□ -2.39
CHD9-204ENST00000561869 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.39
CHD9-204ENST00000561869 MYH9P35579 1960 aaKnown RBP0.09□□□□□ -2.39
CHD9-204ENST00000561869 GNG7O60262 68 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 CCL18P55774 89 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 S100A7L2Q5SY68 101 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 SPTSSBQ8NFR3 76 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 TSC22D3Q99576 134 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 SEC11CQ9BY50 192 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 SERP1Q9Y6X1 66 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 SPTBN2O15020 2390 aa0.09□□□□□ -2.4
CHD9-204ENST00000561869 SPEF2Q9C093 1822 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 UNC79Q9P2D8 2635 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 NWD2Q9ULI1 1742 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 TRAV13-2A0A0B4J235 113 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 HCG22E2RYF7 251 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 FGF7P21781 194 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 COX6A2Q02221 97 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.08□□□□□ -2.4
CHD9-204ENST00000561869 FAM107BQ9H098 131 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 NAA60Q9H7X0 242 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 SPTBN4Q9H254 2564 aa0.08□□□□□ -2.4
CHD9-204ENST00000561869 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms