RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 DLX1P56177 255 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 C5orf38Q86SI9 138 aa14.09□□□□□ -0.15
RAB40C-206ENST00000561781 AKAP6Q13023 2319 aa14.09□□□□□ -0.15
RAB40C-206ENST00000561781 MALRD1Q5VYJ5 2156 aa14.09□□□□□ -0.15
RAB40C-206ENST00000561781 DYNAPQ8N1N2 210 aa14.09□□□□□ -0.15
RAB40C-206ENST00000561781 hADV29S1A0JD25 119 aa14.08□□□□□ -0.16
RAB40C-206ENST00000561781 PRB3Q04118 309 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-206ENST00000561781 C4orf26Q17RF5 130 aa14.08□□□□□ -0.16
RAB40C-206ENST00000561781 C11orf21Q9P2W6 132 aa14.08□□□□□ -0.16
RAB40C-206ENST00000561781 LST1O00453 97 aa14.07□□□□□ -0.16
RAB40C-206ENST00000561781 ABCA12Q86UK0 2595 aa14.07□□□□□ -0.16
RAB40C-206ENST00000561781 SMAD5-AS1Q9Y6J3 95 aa14.07□□□□□ -0.16
RAB40C-206ENST00000561781 FLNBO75369 2602 aaKnown RBP14.07□□□□□ -0.16
RAB40C-206ENST00000561781 IGHV1-8P0DP01 117 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 DLX6P56179 175 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 HRCT1Q6UXD1 115 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 BAHCC1Q9P281 2608 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 POLQO75417 2590 aa14.06□□□□□ -0.16
RAB40C-206ENST00000561781 IGHV1-3A0A0C4DH29 117 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 PRAC2D3DTV9 90 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 F8WDY8 70 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 SMCR5Q8TEV8 140 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 RNASE6Q93091 150 aaKnown RBP14.05□□□□□ -0.16
RAB40C-206ENST00000561781 TMEM141Q96I45 108 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 LEPROTO15243 131 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 SDIM1Q6ZPB5 146 aa14.05□□□□□ -0.16
RAB40C-206ENST00000561781 NDUFB3O43676 98 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 PPP1R17O96001 155 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 TSHBP01222 138 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 HIST1H4AP62805 103 aaKnown RBP14.04□□□□□ -0.16
RAB40C-206ENST00000561781 Q5XG85 94 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 M0R381 172 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 LOXP28300 417 aaPredicted RBP14.04□□□□□ -0.16
RAB40C-206ENST00000561781 UBE2E1P51965 193 aa14.04□□□□□ -0.16
RAB40C-206ENST00000561781 ASH1LQ9NR48 2969 aaKnown RBP14.04□□□□□ -0.16
RAB40C-206ENST00000561781 TRAV41A0A0B4J266 112 aa14.03□□□□□ -0.16
RAB40C-206ENST00000561781 A0A0J9YX75 114 aa14.03□□□□□ -0.16
RAB40C-206ENST00000561781 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
RAB40C-206ENST00000561781 IGIPA6NJ69 53 aa14.03□□□□□ -0.16
RAB40C-206ENST00000561781 RPL39LQ96EH5 51 aaKnown RBP14.03□□□□□ -0.16
RAB40C-206ENST00000561781 MAP1AP78559 2803 aaPredicted RBP14.02□□□□□ -0.16
RAB40C-206ENST00000561781 FBXL19-AS1Q494R0 122 aa14.02□□□□□ -0.16
RAB40C-206ENST00000561781 AGPAT4-IT1Q9H0P7 198 aa14.02□□□□□ -0.16
RAB40C-206ENST00000561781 SPG11Q96JI7 2443 aa14.02□□□□□ -0.17
RAB40C-206ENST00000561781 RNF223E7ERA6 249 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 ZNF876PQ49A33 203 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 CLEC2BQ92478 149 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 TP53TG1Q9Y2A0 90 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 F8W735 103 aaPredicted RBP14.01□□□□□ -0.17
RAB40C-206ENST00000561781 RNF182Q8N6D2 247 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 EEF1AKMT3Q96AZ1 226 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 TIMM17AQ99595 171 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 PEMTQ9UBM1 199 aa14.01□□□□□ -0.17
RAB40C-206ENST00000561781 DCANP1Q8TF63 244 aa14□□□□□ -0.17
RAB40C-206ENST00000561781 UNC79Q9P2D8 2635 aa14□□□□□ -0.17
RAB40C-206ENST00000561781 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
RAB40C-206ENST00000561781 OXTP01178 125 aa13.99□□□□□ -0.17
RAB40C-206ENST00000561781 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
RAB40C-206ENST00000561781 CCL17Q92583 94 aa13.99□□□□□ -0.17
RAB40C-206ENST00000561781 IGLV1-47P01700 117 aa13.99□□□□□ -0.17
RAB40C-206ENST00000561781 SETXQ7Z333 2677 aaKnown RBP13.98□□□□□ -0.17
RAB40C-206ENST00000561781 ITPR2Q14571 2701 aa13.98□□□□□ -0.17
RAB40C-206ENST00000561781 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
RAB40C-206ENST00000561781 TMEM178BH3BS89 294 aa13.98□□□□□ -0.17
RAB40C-206ENST00000561781 BUB1B-PAK6H3BSN5 160 aa13.98□□□□□ -0.17
RAB40C-206ENST00000561781 JPT2Q9H910 190 aa13.98□□□□□ -0.17
RAB40C-206ENST00000561781 APCP25054 2843 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 A0A1W2PPR1 153 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 MALP21145 153 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 DSCR8Q96T75 97 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 CYSTM1Q9H1C7 97 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 PRO0628Q9UI54 55 aa13.97□□□□□ -0.17
RAB40C-206ENST00000561781 TRAV13-1A0A0B4J241 112 aa13.96□□□□□ -0.17
RAB40C-206ENST00000561781 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-206ENST00000561781 SPRY2O43597 315 aa13.96□□□□□ -0.17
RAB40C-206ENST00000561781 BSPH1Q075Z2 132 aa13.96□□□□□ -0.17
RAB40C-206ENST00000561781 FANCD2OSQ96PS1 177 aa13.96□□□□□ -0.17
RAB40C-206ENST00000561781 DYNLRB1Q9NP97 96 aa13.96□□□□□ -0.17
RAB40C-206ENST00000561781 A0A0J9YXY3 114 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 RPL18AQ02543 176 aaKnown RBP13.95□□□□□ -0.18
RAB40C-206ENST00000561781 FAM19A4Q96LR4 140 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 TIMM21Q9BVV7 248 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 TRBV7-1A0A0A6YYK4 115 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 I3L3M4 83 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 PYGO1Q9Y3Y4 419 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 NOTCH2Q04721 2471 aa13.95□□□□□ -0.18
RAB40C-206ENST00000561781 IGLV11-55A0A075B6I3 123 aa13.94□□□□□ -0.18
RAB40C-206ENST00000561781 SERP2Q8N6R1 65 aa13.94□□□□□ -0.18
RAB40C-206ENST00000561781 IGHV3-35A0A0C4DH35 117 aa13.94□□□□□ -0.18
RAB40C-206ENST00000561781 MGPP08493 103 aa13.93□□□□□ -0.18
RAB40C-206ENST00000561781 RHOHQ15669 191 aa13.93□□□□□ -0.18
RAB40C-206ENST00000561781 COX7A1P24310 79 aa13.93□□□□□ -0.18
RAB40C-206ENST00000561781 UPK3BQ9BT76 320 aa13.93□□□□□ -0.18
RAB40C-206ENST00000561781 PRSS2P07478 247 aa13.92□□□□□ -0.18
RAB40C-206ENST00000561781 GPHB5Q86YW7 130 aa13.92□□□□□ -0.18
RAB40C-206ENST00000561781 DAND5Q8N907 189 aa13.92□□□□□ -0.18
RAB40C-206ENST00000561781 PIMREGQ9BSJ6 248 aa13.92□□□□□ -0.18
RAB40C-206ENST00000561781 CTSGP08311 255 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms