RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 LINC01556Q5JQF7 62 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 UQCC3Q6UW78 93 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 NEXN-AS1Q8NBZ9 246 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 FAT2Q9NYQ8 4349 aa12.66□□□□□ -0.38
PKD1-223ENST00000561668 HECTD4Q9Y4D8 3996 aa12.65□□□□□ -0.38
PKD1-223ENST00000561668 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
PKD1-223ENST00000561668 F5H697 171 aa12.65□□□□□ -0.38
PKD1-223ENST00000561668 M0QY20 66 aa12.65□□□□□ -0.38
PKD1-223ENST00000561668 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
PKD1-223ENST00000561668 ZNF56Q15929 161 aa12.65□□□□□ -0.38
PKD1-223ENST00000561668 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
PKD1-223ENST00000561668 IGHV3-30P01768 117 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 IGHV3-33P01772 117 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 IGHV3-30-5P0DP03 117 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 TWIST1Q15672 202 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
PKD1-223ENST00000561668 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
PKD1-223ENST00000561668 PGLYRP4Q96LB8 373 aa12.64□□□□□ -0.39
PKD1-223ENST00000561668 A0A1B0GUT8 65 aa12.63□□□□□ -0.39
PKD1-223ENST00000561668 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
PKD1-223ENST00000561668 PSCAO43653 123 aa12.63□□□□□ -0.39
PKD1-223ENST00000561668 PNRC1Q12796 327 aaPredicted RBP12.63□□□□□ -0.39
PKD1-223ENST00000561668 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
PKD1-223ENST00000561668 NUP35Q8NFH5 326 aa12.62□□□□□ -0.39
PKD1-223ENST00000561668 FRZBQ92765 325 aa12.62□□□□□ -0.39
PKD1-223ENST00000561668 DNAJC30Q96LL9 226 aa12.62□□□□□ -0.39
PKD1-223ENST00000561668 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
PKD1-223ENST00000561668 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 H7C1H1 209 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 PGPEP1Q9NXJ5 209 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 PKD1P98161 4303 aa12.61□□□□□ -0.39
PKD1-223ENST00000561668 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
PKD1-223ENST00000561668 TMEM191AQ9H0A3 160 aa12.6□□□□□ -0.39
PKD1-223ENST00000561668 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
PKD1-223ENST00000561668 RASL11AQ6T310 242 aa12.59□□□□□ -0.39
PKD1-223ENST00000561668 Q9HAA7 133 aa12.59□□□□□ -0.39
PKD1-223ENST00000561668 MGPP08493 103 aa12.58□□□□□ -0.4
PKD1-223ENST00000561668 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
PKD1-223ENST00000561668 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
PKD1-223ENST00000561668 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
PKD1-223ENST00000561668 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
PKD1-223ENST00000561668 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
PKD1-223ENST00000561668 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
PKD1-223ENST00000561668 ADCYAP1P18509 176 aa12.57□□□□□ -0.4
PKD1-223ENST00000561668 KRTAP10-2P60368 255 aa12.57□□□□□ -0.4
PKD1-223ENST00000561668 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
PKD1-223ENST00000561668 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
PKD1-223ENST00000561668 A0A087WTM6 91 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 RIGQ13278 110 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 LAGE3Q14657 143 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 ANAPC16Q96DE5 110 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 SEC11CQ9BY50 192 aa12.56□□□□□ -0.4
PKD1-223ENST00000561668 A0A087WX48 190 aa12.55□□□□□ -0.4
PKD1-223ENST00000561668 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
PKD1-223ENST00000561668 A0A1B0GW15 77 aa12.55□□□□□ -0.4
PKD1-223ENST00000561668 C10orf91Q5T1B1 145 aa12.55□□□□□ -0.4
PKD1-223ENST00000561668 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
PKD1-223ENST00000561668 TMEM262E9PQX1 116 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 ELOBQ15370 118 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 NIT1Q86X76 327 aa12.54□□□□□ -0.4
PKD1-223ENST00000561668 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
PKD1-223ENST00000561668 RAB4AP20338 218 aa12.53□□□□□ -0.4
PKD1-223ENST00000561668 CHCHD7Q9BUK0 85 aa12.53□□□□□ -0.4
PKD1-223ENST00000561668 A0A1B0GXF2 115 aa12.52□□□□□ -0.41
PKD1-223ENST00000561668 CDK2AP2O75956 126 aa12.52□□□□□ -0.41
PKD1-223ENST00000561668 MT-ND4LP03901 98 aa12.52□□□□□ -0.41
PKD1-223ENST00000561668 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
PKD1-223ENST00000561668 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
PKD1-223ENST00000561668 F8W036 122 aa12.51□□□□□ -0.41
PKD1-223ENST00000561668 IQCJQ1A5X6 159 aa12.51□□□□□ -0.41
PKD1-223ENST00000561668 Q8N3U1 123 aa12.51□□□□□ -0.41
PKD1-223ENST00000561668 RMI2Q96E14 147 aa12.51□□□□□ -0.41
PKD1-223ENST00000561668 PKIAP61925 76 aa12.5□□□□□ -0.41
PKD1-223ENST00000561668 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
PKD1-223ENST00000561668 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
PKD1-223ENST00000561668 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
PKD1-223ENST00000561668 PKHD1P08F94 4074 aa12.5□□□□□ -0.41
PKD1-223ENST00000561668 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
PKD1-223ENST00000561668 AMN1Q8IY45 258 aa12.49□□□□□ -0.41
PKD1-223ENST00000561668 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
PKD1-223ENST00000561668 CARHSP1Q9Y2V2 147 aaKnown RBP12.49□□□□□ -0.41
PKD1-223ENST00000561668 KIAA1109Q2LD37 5005 aa12.49□□□□□ -0.41
PKD1-223ENST00000561668 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
PKD1-223ENST00000561668 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
PKD1-223ENST00000561668 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
PKD1-223ENST00000561668 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
PKD1-223ENST00000561668 S100A8P05109 93 aa12.47□□□□□ -0.41
PKD1-223ENST00000561668 FUSP35637 526 aaKnown RBP eCLIP12.47□□□□□ -0.41
PKD1-223ENST00000561668 HBBP68871 147 aa12.47□□□□□ -0.41
PKD1-223ENST00000561668 CTDSP1Q9GZU7 261 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms